Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AP003461.1-201ENST00000528866 78 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AP000889.1-201ENST00000530968 660 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC091304.9-201ENST00000612091 226 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC011155.2-201ENST00000623202 216 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
VAPAQ9P0L0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 SNORD32A-201ENST00000364805 84 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RNU6-378P-201ENST00000384324 107 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RNU6-1026P-201ENST00000384465 108 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RNU6-925P-201ENST00000384629 104 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MIR764-201ENST00000390811 85 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 SNORA11.2-201ENST00000408318 127 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RN7SKP61-201ENST00000410642 295 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RPL37P10-201ENST00000412884 288 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MTND5P17-201ENST00000418405 1603 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 EIF1P1-201ENST00000421436 341 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL591806.2-201ENST00000433122 173 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 GTF2IP13-201ENST00000438487 386 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MTND1P18-201ENST00000448191 573 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AC010531.2-201ENST00000465012 153 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL163973.1-201ENST00000484753 577 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MTATP6P9-201ENST00000515039 680 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 RNU2-46P-201ENST00000517038 113 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPAQ9P0L0 EIF4A1P12-201ENST00000551910 141 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 Z99289.3-201ENST00000605586 594 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AP000240.1-201ENST00000609910 452 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 AL078595.3-201ENST00000623815 1166 ntBASIC1.02□□□□□ -2.25
VAPAQ9P0L0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 RNU6-552P-201ENST00000362869 119 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 SNORA63D-201ENST00000364359 132 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 Y_RNA.367-201ENST00000365544 101 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 MTCO3P29-201ENST00000432119 779 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 UBE2D3P4-201ENST00000441973 436 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 TAF9P1-201ENST00000445421 515 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC132479.1-201ENST00000449160 144 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AL133217.1-201ENST00000450980 425 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC007395.1-201ENST00000451333 677 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 TAF9P2-201ENST00000454958 515 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AL162395.1-201ENST00000457882 422 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC016925.1-201ENST00000458303 298 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 MTCO3P7-201ENST00000510008 774 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 Vault.3-201ENST00000516676 95 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC090572.1-201ENST00000519251 160 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 RAB11AP2-201ENST00000545905 639 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC008751.2-201ENST00000597885 980 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 MIR7844-201ENST00000616161 122 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC022306.3-201ENST00000619930 550 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC009033.1-201ENST00000624279 431 ntBASIC1.01□□□□□ -2.25
VAPAQ9P0L0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VAPAQ9P0L0 AC092268.1-201ENST00000342691 405 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 RNU6-877P-201ENST00000383868 107 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 MTCO1P21-201ENST00000416634 589 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1□□□□□ -2.25
VAPAQ9P0L0 AC073614.1-201ENST00000438690 650 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AL031274.1-201ENST00000450334 232 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AC009474.2-201ENST00000451383 136 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 snoU13.27-201ENST00000459278 104 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1□□□□□ -2.25
VAPAQ9P0L0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1□□□□□ -2.25
VAPAQ9P0L0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1□□□□□ -2.25
VAPAQ9P0L0 AC090517.1-201ENST00000569307 266 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1□□□□□ -2.25
VAPAQ9P0L0 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AC098848.2-201ENST00000588023 330 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AC091805.2-201ENST00000603848 235 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 MIR8065-201ENST00000620577 100 ntBASIC1□□□□□ -2.25
VAPAQ9P0L0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1□□□□□ -2.25
VAPAQ9P0L0 Y_RNA.132-201ENST00000363421 102 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 Y_RNA.504-201ENST00000384481 104 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 SNORA26.3-201ENST00000391119 136 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AL133396.1-201ENST00000432048 687 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 SNAP23P1-201ENST00000433229 246 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AC073910.1-201ENST00000445047 438 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AC013470.1-201ENST00000453438 462 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms