Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC109479.2-201ENST00000517842 174 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 CBX3P8-201ENST00000532412 525 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 AC010186.2-204ENST00000537668 439 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR4435-1-201ENST00000582552 80 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 AL121655.1-201ENST00000605811 308 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 AC005014.2-201ENST00000607795 599 ntBASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NCKIPSDQ9NZQ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-105P-201ENST00000363909 104 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU1-115P-201ENST00000365329 160 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.401-201ENST00000383965 117 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNY1P14-201ENST00000384426 108 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 SNORA41-201ENST00000384675 132 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AL133475.1-201ENST00000404414 305 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 MTCYBP9-201ENST00000431021 303 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RPS15AP10-201ENST00000432472 382 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AP001324.2-201ENST00000461163 319 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-764P-201ENST00000516396 105 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 CR383656.8-201ENST00000549046 145 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC004817.2-201ENST00000561794 651 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC006006.1-201ENST00000603082 144 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 uc_338.14-201ENST00000613162 166 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 AC087588.2-201ENST00000617667 426 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR7515-201ENST00000637837 67 ntBASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
NCKIPSDQ9NZQ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR449A-201ENST00000362113 91 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.364-201ENST00000365532 101 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR548F4-201ENST00000408515 105 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL513477.1-202ENST00000417061 214 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MTND3P9-201ENST00000429526 346 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL591043.1-201ENST00000432461 424 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL160004.2-201ENST00000432935 350 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL353997.1-201ENST00000432936 108 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC004383.1-201ENST00000438135 289 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC011816.1-201ENST00000441346 546 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RN7SL429P-201ENST00000479090 223 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RN7SL489P-201ENST00000486185 223 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RN7SL327P-201ENST00000488659 223 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MTCO2P24-201ENST00000515611 426 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-612P-201ENST00000516909 102 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 BNIP3P16-201ENST00000589779 534 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RN7SL853P-201ENST00000617250 223 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC097372.5-201ENST00000623665 376 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MAPK10-266ENST00000641066 6555 ntBASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
NCKIPSDQ9NZQ3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SNORD56.1-201ENST00000362913 68 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.452-201ENST00000384202 108 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 RNU6-933P-201ENST00000384424 107 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR521-1-201ENST00000384902 87 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AL512633.1-201ENST00000399931 655 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 MIR1302-3-201ENST00000408128 138 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AC008267.5-201ENST00000424928 265 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Z98742.2-201ENST00000431564 187 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AL109933.2-201ENST00000452651 260 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AC079354.2-201ENST00000453523 154 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 RN7SL297P-201ENST00000483161 293 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 ACA59.1-201ENST00000515966 143 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 Y_RNA.661-201ENST00000516003 99 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SNORA31.6-201ENST00000516241 130 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SNORD116.3-201ENST00000517176 78 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NCKIPSDQ9NZQ3 AP005902.1-201ENST00000521358 186 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms