Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 AC079610.2-201ENST00000604818 690 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 SNORA42.1-201ENST00000363515 137 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 SNORA75.2-201ENST00000391138 150 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 SNORA75.3-201ENST00000391231 150 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 MTND2P21-201ENST00000436242 1042 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RPS29P15-201ENST00000458329 171 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 AL357312.1-201ENST00000603879 298 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 AL355598.1-201ENST00000604169 202 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 AC009237.15-201ENST00000610252 501 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 AC138749.5-201ENST00000611461 208 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 U6.99-201ENST00000637524 83 ntBASIC-0.07□□□□□ -2.42
CHD8Q9HCK8 RNA5SP93-201ENST00000362525 114 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNU6-898P-201ENST00000365627 104 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MIR186-201ENST00000384988 86 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MTND1P30-201ENST00000441241 901 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL929288.2-201ENST00000446368 407 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RPL7P55-201ENST00000450522 746 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC012308.1-201ENST00000451232 178 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MTCO2P18-201ENST00000457151 658 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC024589.1-201ENST00000512207 263 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNU6-678P-201ENST00000516832 109 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 IGJP1-201ENST00000522682 475 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MIR3169-201ENST00000578032 83 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 SEPT14P17-201ENST00000617978 177 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MIR8063-201ENST00000621930 81 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 SNORD115-24-201ENST00000363528 82 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNU4-45P-201ENST00000365469 141 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 MIR421-201ENST00000365696 85 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL357139.1-201ENST00000407792 426 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC010153.1-201ENST00000432862 727 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 SNORD79.1-201ENST00000516069 84 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 SUMO2P16-201ENST00000519475 264 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AC040926.1-201ENST00000530195 238 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AP002453.2-201ENST00000533503 320 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL020997.3-201ENST00000602843 359 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 AL157786.1-207ENST00000627771 695 ntBASIC-0.08□□□□□ -2.42
CHD8Q9HCK8 RNU6-778P-201ENST00000363269 103 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 RNU6-438P-201ENST00000365561 103 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 RNU6-969P-201ENST00000383900 105 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 COX6CP10-201ENST00000416832 224 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC007435.1-201ENST00000421086 415 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 MTND3P4-201ENST00000453537 303 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 RNA5SP135-201ENST00000517019 125 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC090330.1-201ENST00000588646 764 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC091912.2-201ENST00000624798 167 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 CASC19-280ENST00000642102 1351 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 MTND1P3-201ENST00000484956 952 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 MIR4782-201ENST00000577987 79 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AP001429.1-201ENST00000602568 530 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC021506.2-201ENST00000612354 169 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC107075.1-201ENST00000613695 314 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 AC008993.2-201ENST00000631744 806 ntBASIC-0.09□□□□□ -2.42
CHD8Q9HCK8 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 RNU6-793P-201ENST00000384233 104 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 RNU6-296P-201ENST00000384608 107 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 SNORD12-201ENST00000391002 90 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 ARL5AP1-201ENST00000418991 388 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 MTCO2P34-201ENST00000421994 607 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 PSMA6P3-201ENST00000428242 164 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 C8orf59P1-201ENST00000429930 303 ntBASIC-0.1□□□□□ -2.43
CHD8Q9HCK8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms