Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 MIR369-201ENST00000362155 70 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.187-201ENST00000363918 113 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.533-201ENST00000384596 114 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AP000275.1-201ENST00000411943 390 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 USMG5P1-201ENST00000425964 177 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 MTCO2P12-201ENST00000427426 682 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AL353997.1-201ENST00000432936 108 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC007677.1-201ENST00000445757 515 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 RPL36AP48-201ENST00000485521 314 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 SNORA31.6-201ENST00000516241 130 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC007375.1-201ENST00000554513 578 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC093249.1-201ENST00000567049 203 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC105137.2-201ENST00000569073 466 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC090897.2-201ENST00000581715 130 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC044792.1-201ENST00000593294 196 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 VN1R107P-201ENST00000601784 209 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC078795.3-201ENST00000602913 472 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC006023.1-201ENST00000603944 259 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC098657.3-201ENST00000620434 263 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 AC090971.5-201ENST00000621102 293 ntBASIC2.52□□□□□ -2.01
PCDH9Q9HC56 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDH9Q9HC56 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AL136360.1-201ENST00000503377 1900 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 RNU6-212P-201ENST00000362642 104 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.315-201ENST00000365117 102 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 RNU6-622P-201ENST00000384272 103 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.504-201ENST00000384481 104 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 RNA5SP390-201ENST00000410191 113 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 RNU6-174P-201ENST00000410406 106 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AL445687.1-201ENST00000439946 251 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 ELOCP24-201ENST00000456370 334 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 CBX3P8-201ENST00000532412 525 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 HSPE1P4-201ENST00000550617 308 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 HAUS6P2-201ENST00000433254 2404 ntBASIC2.51□□□□□ -2.01
PCDH9Q9HC56 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDH9Q9HC56 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MTND5P10-201ENST00000603719 1809 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 SNORD50.1-201ENST00000362987 71 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 SNORD114-19-201ENST00000363072 75 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 RNU6-529P-201ENST00000363383 104 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.138-201ENST00000363462 102 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AL591034.2-201ENST00000402839 359 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC022493.2-201ENST00000506122 481 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 COX6CP5-201ENST00000527162 228 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MRPS36P4-201ENST00000534436 298 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 AC096772.1-201ENST00000609146 564 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 MTND5P9-201ENST00000503854 1755 ntBASIC2.5□□□□□ -2.01
PCDH9Q9HC56 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDH9Q9HC56 SNORD32A-201ENST00000364805 84 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 RNU6-596P-201ENST00000365395 98 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 RNU6-1222P-201ENST00000384615 107 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 MIR518C-201ENST00000384822 101 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AC104389.3-201ENST00000445629 235 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDH9Q9HC56 RNU6-264P-201ENST00000517134 104 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms