Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC073073.2-201ENST00000609827 2578 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.304-201ENST00000365011 112 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 MIR613-201ENST00000385248 95 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 RPL21P17-201ENST00000397467 475 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 SNORD2.1-201ENST00000458762 69 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC005921.1-201ENST00000510589 286 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 SNORA31.16-201ENST00000516773 139 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC021231.3-201ENST00000558497 370 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 MIR4429-201ENST00000580105 73 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 MIR5187-201ENST00000583479 76 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 AC022441.3-201ENST00000605737 136 ntBASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SEC61A2Q9H9S3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 USP8P1-201ENST00000494673 3183 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 MTND5P35-201ENST00000557537 1720 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC007656.2-201ENST00000624902 4547 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 Y_RNA.101-201ENST00000363154 102 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU4-80P-201ENST00000363200 141 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 SNORD115-8-201ENST00000363856 82 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-270P-201ENST00000364131 105 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-704P-201ENST00000364162 103 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 SNORD115-38-201ENST00000365037 82 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNY1P5-201ENST00000383890 115 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 SNORA5A-201ENST00000384111 134 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AL035423.1-201ENST00000420331 213 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC012306.1-201ENST00000423267 114 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC019205.3-201ENST00000424573 156 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC006989.1-201ENST00000427212 131 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC078809.1-201ENST00000427601 140 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC112220.1-201ENST00000434628 355 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 IFNA11P-201ENST00000446352 526 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC005042.3-201ENST00000453230 174 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-625P-201ENST00000459412 107 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC104619.4-201ENST00000510773 249 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU1-95P-201ENST00000516357 160 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNU1-128P-201ENST00000516704 160 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RNA5SP468-201ENST00000516782 93 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC018448.1-201ENST00000552843 316 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 MIR548AI-201ENST00000579940 88 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 AL365265.1-201ENST00000621045 234 ntBASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A2Q9H9S3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.21□□□□□ -1.89
SEC61A2Q9H9S3 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC092268.1-201ENST00000342691 405 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-727P-201ENST00000363592 107 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RNU4-56P-201ENST00000364700 142 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP189-201ENST00000364920 115 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 SNORD113-1-201ENST00000365321 69 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 SNORA48.7-201ENST00000391302 135 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-394P-201ENST00000410735 107 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-1135P-201ENST00000411083 103 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC005300.1-201ENST00000428401 373 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 ARF4P2-201ENST00000430209 526 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 RPS15AP5-201ENST00000436276 388 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 HMGN2P10-201ENST00000448085 265 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC021739.1-201ENST00000559631 174 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC004467.1-201ENST00000615678 330 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC034229.5-201ENST00000624258 185 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 snoU18.1-201ENST00000629629 71 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 MIR3529-201ENST00000637713 78 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms