Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-2-201ENST00000384627 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-29P-201ENST00000384637 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-9-201ENST00000384776 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-33P-201ENST00000384793 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 MIR514A2-201ENST00000385131 88 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 MIR514A3-201ENST00000385132 88 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 MIR561-201ENST00000385216 97 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-192P-201ENST00000391253 100 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC074117.2-201ENST00000417130 397 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 ARL5AP1-201ENST00000418991 388 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AL353689.1-201ENST00000438895 199 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AP001025.1-201ENST00000486139 332 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 SNORA31.23-201ENST00000517219 133 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC069113.1-201ENST00000517763 267 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 COPS8P3-201ENST00000526024 482 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC109635.3-201ENST00000529536 185 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC021646.1-201ENST00000605469 484 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-6P-201ENST00000606623 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 DISC2.1-201ENST00000612827 205 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RBBP8P1-201ENST00000449447 1844 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NXF3Q9H4D5 RNU6-1010P-201ENST00000362757 107 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 SNORD114-19-201ENST00000363072 75 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.402-201ENST00000383972 102 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AL133475.1-201ENST00000404414 305 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 RNU6-1068P-201ENST00000410958 103 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 EDDM3CP-201ENST00000415977 425 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 MTCO1P20-201ENST00000425366 358 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 USP9YP18-201ENST00000425912 695 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AL121601.2-201ENST00000438019 707 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC112771.1-201ENST00000463581 102 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 SNORA14.1-201ENST00000516113 141 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 RNU6-189P-201ENST00000516120 101 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC109479.2-201ENST00000517842 174 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 MTND1P5-201ENST00000517906 940 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC109329.1-201ENST00000518744 317 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AL118558.2-201ENST00000556294 238 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC136619.2-201ENST00000563361 631 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 VN1R80P-201ENST00000597126 338 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC080078.2-201ENST00000603766 501 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC123912.5-201ENST00000605470 343 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 AC103705.1-201ENST00000619013 241 ntBASIC1.78□□□□□ -2.12
NXF3Q9H4D5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NXF3Q9H4D5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.13
NXF3Q9H4D5 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC121333.1-201ENST00000567488 2709 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 RNU1-72P-201ENST00000362976 153 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 RNY3P3-201ENST00000363816 102 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.231-201ENST00000364358 102 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.378-201ENST00000365652 113 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.450-201ENST00000384198 113 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 RNA5SP219-201ENST00000390940 113 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 POLHP1-201ENST00000411806 470 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 MTCO1P21-201ENST00000416634 589 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC012308.1-201ENST00000451232 178 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC013470.1-201ENST00000453438 462 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC087884.1-201ENST00000469738 328 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.654-201ENST00000497848 106 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 SNORA25.11-201ENST00000515935 105 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.77□□□□□ -2.13
NXF3Q9H4D5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC004492.1-201ENST00000607036 742 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 AC073869.6-201ENST00000640656 341 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NXF3Q9H4D5 OR4G1P-203ENST00000641984 1631 ntBASIC1.77□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.38-201ENST00000362617 102 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-451P-201ENST00000362921 107 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.167-201ENST00000363735 109 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.595-201ENST00000410403 105 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 SNRPEP10-201ENST00000420249 274 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC007969.2-201ENST00000441891 191 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-1208P-201ENST00000459588 107 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-1038P-201ENST00000516516 104 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-1069P-201ENST00000516612 133 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC090897.2-201ENST00000581715 130 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC092747.3-201ENST00000603769 301 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-89P-201ENST00000606519 100 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC092807.2-201ENST00000609367 243 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms