Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC074198.2-201ENST00000508153 258 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 NACAP3-201ENST00000552100 481 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC021231.3-201ENST00000558497 370 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC009163.5-201ENST00000575421 637 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 FAM35BP-202ENST00000497389 3337 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AL161912.2-201ENST00000565707 3007 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 SNORA46.1-201ENST00000391069 153 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 SNORA26.3-201ENST00000391119 136 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 RPS26P42-201ENST00000413485 326 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 RPS29P4-201ENST00000414733 161 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.638-201ENST00000459374 113 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC104619.4-201ENST00000510773 249 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.679-201ENST00000516416 91 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 SNORA27.4-201ENST00000516650 95 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC008011.1-201ENST00000545989 227 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC007179.3-201ENST00000604976 235 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AL590240.4-201ENST00000616908 390 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AC022149.2-201ENST00000621061 203 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 MIR3529-201ENST00000637713 78 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXP3Q9BZS1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
FOXP3Q9BZS1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.71□□□□□ -1.81
FOXP3Q9BZS1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.418-201ENST00000384029 102 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 YPEL5P1-201ENST00000419731 367 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC244670.1-201ENST00000436879 112 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AP000705.1-201ENST00000454567 350 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC010401.1-201ENST00000463867 348 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC109925.1-201ENST00000478069 331 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 RNA5SP54-201ENST00000516951 92 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC022559.1-201ENST00000520905 205 ntBASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXP3Q9BZS1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 MFSD8-236ENST00000641509 4050 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RNU6-873P-201ENST00000363833 107 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.331-201ENST00000365267 102 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RNU6-487P-201ENST00000365430 104 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 POLR2KP2-201ENST00000438155 177 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC007395.1-201ENST00000451333 677 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RPL26P9-201ENST00000457466 433 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 SNORD2.1-201ENST00000458762 69 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 snoU13.6-201ENST00000458785 104 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AL133162.1-201ENST00000463228 453 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC084357.1-201ENST00000473404 255 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC021205.2-201ENST00000480069 347 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RPS4XP13-201ENST00000483219 789 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RPS29P20-201ENST00000489592 171 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RNU6-581P-201ENST00000516214 105 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC011602.1-201ENST00000546484 331 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 MIR3922-201ENST00000585192 84 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC005176.2-201ENST00000596933 147 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AL359198.2-201ENST00000611836 194 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms