Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC092451.2-201ENST00000538746 658 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 ADI1P3-201ENST00000549509 470 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC092106.3-201ENST00000611308 722 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC026585.1-201ENST00000619582 524 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC009541.1-201ENST00000438279 2662 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AL445523.1-201ENST00000451184 1362 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 RNU6-78P-201ENST00000362897 107 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 RNU6-1179P-201ENST00000384667 107 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 RN7SKP61-201ENST00000410642 295 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AL031779.1-201ENST00000415663 330 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 ARL5AP1-201ENST00000418991 388 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AL591043.1-201ENST00000432461 424 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AC099677.2-201ENST00000436385 175 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AC016550.1-201ENST00000505348 785 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AC104806.1-201ENST00000508720 308 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 MTND3P5-201ENST00000512798 333 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 RNU7-51P-201ENST00000516560 62 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 MIR4307-201ENST00000582802 84 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AL034555.1-201ENST00000604816 211 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AL022345.2-201ENST00000606307 135 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AP002360.4-201ENST00000606980 481 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AC108747.1-201ENST00000609508 535 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 AC131159.1-201ENST00000621854 213 ntBASIC0.91□□□□□ -2.26
UPF3BQ9BZI7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 MTCYBP2-201ENST00000407745 171 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 MTCO3P29-201ENST00000432119 779 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AC132479.1-201ENST00000449160 144 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 LRRC34P2-201ENST00000514850 553 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 CYP4A27P-201ENST00000567218 190 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 RPL17P51-201ENST00000605218 238 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 AL139022.2-201ENST00000606934 443 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
UPF3BQ9BZI7 MIR330-201ENST00000362196 94 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 RNA5SP62-201ENST00000363457 110 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 RNU6-716P-201ENST00000365621 103 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 SNORD116.1-201ENST00000365628 92 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 MIR578-201ENST00000384828 96 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 EEF1A1P39-201ENST00000440791 250 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 HMGN2P9-201ENST00000476875 229 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 AC092989.1-201ENST00000481235 277 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 AC145146.1-201ENST00000496370 254 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 RNU6-276P-201ENST00000516114 96 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 DEFB108E-201ENST00000524692 240 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 AL139286.2-201ENST00000606838 396 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 AL589743.1-201ENST00000551932 2712 ntBASIC0.89□□□□□ -2.27
UPF3BQ9BZI7 RNU6-371P-201ENST00000364283 108 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 RNU6-438P-201ENST00000365561 103 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 SNORA12-201ENST00000391162 147 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AL358176.2-201ENST00000425769 204 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 snoU13.27-201ENST00000459278 104 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AC123904.2-201ENST00000548059 300 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AC121334.2-201ENST00000605387 271 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 AC012409.4-201ENST00000612923 249 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UPF3BQ9BZI7 RNU5E-7P-201ENST00000365290 117 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 SNORA32.2-201ENST00000384049 122 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 MIR544A-201ENST00000384855 91 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AL360271.2-201ENST00000447710 161 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 RN7SKP88-201ENST00000516847 250 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AC107934.1-201ENST00000522215 217 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 MTATP6P15-201ENST00000527233 835 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AP003168.1-201ENST00000530091 307 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 AC008752.3-201ENST00000588113 712 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms