Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC091932.3-201ENST00000624223 323 ntBASIC2.05□□□□□ -2.08
CCM2Q9BSQ5 AC100810.6-201ENST00000638068 285 ntBASIC2.05□□□□□ -2.08
CCM2Q9BSQ5 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
CCM2Q9BSQ5 MTND4P23-201ENST00000447723 1363 ntBASIC2.05□□□□□ -2.08
CCM2Q9BSQ5 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
CCM2Q9BSQ5 RNU6-944P-201ENST00000364023 107 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU4-56P-201ENST00000364700 142 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 SNORD32A-201ENST00000364805 84 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 SNORA25B-201ENST00000365507 128 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 BTF3L4P2-201ENST00000392798 346 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 Y_RNA.597-201ENST00000410463 100 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU2-32P-201ENST00000411193 191 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 MTND3P9-201ENST00000429526 346 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 U8.21-201ENST00000459536 136 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 HMGB1P35-201ENST00000503360 598 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC091874.1-201ENST00000511402 339 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC011352.1-201ENST00000512300 793 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU6-612P-201ENST00000516909 102 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC118273.2-201ENST00000532092 465 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 TRAV32-201ENST00000553993 340 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC008749.1-201ENST00000597650 306 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AP000907.4-201ENST00000604143 237 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AL034555.1-201ENST00000604816 211 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AL356157.2-201ENST00000605122 111 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC068944.2-201ENST00000610373 403 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 FAM157A-202ENST00000615155 405 ntBASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCM2Q9BSQ5 RNU6-546P-201ENST00000383991 107 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AP000275.1-201ENST00000411943 390 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 VN1R36P-201ENST00000414936 291 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 EIF1P1-201ENST00000421436 341 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 UBE2V1P4-201ENST00000425374 344 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC078809.1-201ENST00000427601 140 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 MTND1P4-201ENST00000435196 415 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC016632.1-201ENST00000503994 196 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC022447.4-201ENST00000504053 364 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC025465.4-201ENST00000513422 638 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 RNU6-965P-201ENST00000516721 96 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 SNORA31.16-201ENST00000516773 139 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 RN7SKP256-201ENST00000517201 314 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 MIR3136-201ENST00000583498 78 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 AC090617.10-201ENST00000624308 134 ntBASIC2.03□□□□□ -2.08
CCM2Q9BSQ5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 RNU6-933P-201ENST00000384424 107 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 Y_RNA.619-201ENST00000410951 90 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC009161.1-201ENST00000417306 376 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 OOSP1P1-201ENST00000423265 274 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 MTCYBP18-201ENST00000501056 747 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AC007014.2-201ENST00000615581 479 ntBASIC2.02□□□□□ -2.09
CCM2Q9BSQ5 AP000560.1-201ENST00000624150 1937 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 AC092268.1-201ENST00000342691 405 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 RNU6-227P-201ENST00000362865 103 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 Y_RNA.100-201ENST00000363141 102 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 RNU6-743P-201ENST00000364151 106 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 RNU6-128P-201ENST00000383976 107 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 RNU6-142P-201ENST00000384019 107 ntBASIC2.01□□□□□ -2.09
CCM2Q9BSQ5 MIR1277-201ENST00000408536 78 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms