Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC079354.2-201ENST00000453523 154 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AIG1P1-201ENST00000503376 148 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 RNU2-53P-201ENST00000516257 147 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AL590705.4-201ENST00000532209 134 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 MIR3199-1-201ENST00000582434 88 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC060766.3-201ENST00000591442 263 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC010620.2-201ENST00000600135 313 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC013412.1-201ENST00000610687 192 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 SNORD98-201ENST00000636377 67 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AP000560.1-201ENST00000624150 1937 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 RNU6-595P-201ENST00000363944 107 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC243428.1-201ENST00000421099 264 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 RN7SKP210-201ENST00000459176 261 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC092185.1-201ENST00000491371 97 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 RNU7-175P-201ENST00000515915 61 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 RNU6-976P-201ENST00000516086 111 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 RNA5SP282-201ENST00000516355 108 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 MIR3136-201ENST00000583498 78 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 AC005014.2-201ENST00000607795 599 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
PAAF1Q9BRP4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.128-201ENST00000363391 112 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.138-201ENST00000363462 102 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU6-99P-201ENST00000364721 107 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU4-9P-201ENST00000364951 139 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 SNORA29-201ENST00000384183 140 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AL513477.1-202ENST00000417061 214 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC007098.1-201ENST00000420122 367 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC092423.1-201ENST00000430165 186 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC005534.2-201ENST00000431047 433 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC073901.1-201ENST00000462471 408 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RPL30P1-201ENST00000488676 339 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC140059.1-201ENST00000489238 361 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNA5SP320-201ENST00000516263 124 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU6-567P-201ENST00000516746 107 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 RNU6-699P-201ENST00000517081 110 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC016256.1-201ENST00000547971 354 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC091544.4-201ENST00000555268 342 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AL356055.1-201ENST00000602528 446 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AL159153.1-201ENST00000619688 317 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AC134503.1-201ENST00000633048 54 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
PAAF1Q9BRP4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 MTND4P27-201ENST00000450813 1354 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNORA68.1-201ENST00000364537 132 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNORD42.2-201ENST00000365570 69 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.428-201ENST00000384078 102 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 AL354751.2-201ENST00000415471 210 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 MTCYBP10-201ENST00000424905 650 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.631-201ENST00000459607 101 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 AC087477.1-201ENST00000465747 340 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 RPL23AP75-201ENST00000491601 451 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNORA31.16-201ENST00000516773 139 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNRPGP18-201ENST00000553000 214 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 SNORA43.4-201ENST00000629559 138 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 MIR7157-201ENST00000635801 60 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms