Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC132942.1-201ENST00000486753 483 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC010486.2-201ENST00000505572 483 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 HSPE1P4-201ENST00000550617 308 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC103996.1-201ENST00000555468 102 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 SUB1P2-201ENST00000556401 297 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC015720.1-201ENST00000565251 277 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 RSL24D1P11-201ENST00000591045 491 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 VN1R107P-201ENST00000601784 209 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AC025449.1-201ENST00000603896 529 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 AP001596.2-201ENST00000608410 312 ntBASIC1.57□□□□□ -2.16
RPRD1AQ96P16 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.57□□□□□ -2.16
RPRD1AQ96P16 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 MIR340-201ENST00000362125 95 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 MIR424-201ENST00000362227 98 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AL358934.1-201ENST00000432346 324 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 Y_RNA.638-201ENST00000459374 113 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 ATP5EP1-201ENST00000510257 156 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC078795.3-201ENST00000602913 472 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC016925.2-201ENST00000605108 242 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 uc_338.5-201ENST00000611839 155 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC136475.10-201ENST00000620253 385 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AC120349.3-201ENST00000624377 529 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPRD1AQ96P16 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
RPRD1AQ96P16 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 SNORA26.3-201ENST00000391119 136 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC068050.1-201ENST00000394891 380 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 RPL23AP95-201ENST00000426806 265 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 MTCO2P11-201ENST00000431069 680 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC132479.1-201ENST00000449160 144 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AK3P2-201ENST00000507976 429 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC091874.1-201ENST00000511402 339 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC109446.1-201ENST00000566172 220 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 MIR5583-1-201ENST00000580941 59 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 AL450472.1-202ENST00000637286 180 ntBASIC1.55□□□□□ -2.16
RPRD1AQ96P16 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 RNU4-62P-201ENST00000410125 130 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 RNU2-29P-201ENST00000410423 189 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC123900.1-201ENST00000420390 96 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC078809.1-201ENST00000427601 140 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 RNU1-131P-201ENST00000458943 161 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 SUB1P4-201ENST00000566062 339 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC145350.1-201ENST00000567426 208 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC005786.1-201ENST00000588553 154 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AC040904.1-201ENST00000590850 223 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 AL390237.1-201ENST00000404226 1415 ntBASIC1.54□□□□□ -2.16
RPRD1AQ96P16 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
RPRD1AQ96P16 RNU6-552P-201ENST00000362869 119 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 Y_RNA.399-201ENST00000383955 105 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 RNU6-903P-201ENST00000391270 109 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 RNU6-174P-201ENST00000410406 106 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL133396.1-201ENST00000432048 687 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 CETN4P-201ENST00000432407 469 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 MTND1P27-201ENST00000451117 902 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 Y_RNA.675-201ENST00000516389 149 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 RNU6-430P-201ENST00000517078 107 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL356157.2-201ENST00000605122 111 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms