Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU6-327P-201ENST00000516270 127 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RNU4-77P-201ENST00000516692 156 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RN7SKP40-201ENST00000517211 242 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 AC010928.2-201ENST00000588017 287 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RPS15AP11-201ENST00000594193 385 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AC116312.1-201ENST00000606841 314 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 SNORD58B-201ENST00000607313 66 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 AL450472.1-202ENST00000637286 180 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS50Q96JG6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
VPS50Q96JG6 MIR22-201ENST00000362190 85 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 U3.13-201ENST00000364804 214 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 Y_RNA.405-201ENST00000383979 100 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU6-968P-201ENST00000384076 107 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 Y_RNA.451-201ENST00000384200 100 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU6-738P-201ENST00000384531 106 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 Y_RNA.524-201ENST00000384564 100 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 Y_RNA.561-201ENST00000384694 100 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AL358453.1-201ENST00000422522 250 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC092423.1-201ENST00000430165 186 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 AL513124.1-201ENST00000450410 614 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RNU7-169P-201ENST00000459456 61 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RPL31P41-201ENST00000477967 372 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 RPL23AP75-201ENST00000491601 451 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC083906.5-201ENST00000503722 328 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 MRPS36P2-201ENST00000512569 299 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 SCARNA13-201ENST00000516672 275 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AL590705.4-201ENST00000532209 134 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC004584.2-201ENST00000570407 410 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 PART1_1.1-201ENST00000611761 217 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC087588.2-201ENST00000617667 426 ntBASIC2.9□□□□□ -1.95
VPS50Q96JG6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS50Q96JG6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS50Q96JG6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS50Q96JG6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 SNORA29-201ENST00000384183 140 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 Y_RNA.645-201ENST00000391229 102 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 MRPL42P3-201ENST00000401492 326 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AL353752.1-201ENST00000454946 260 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC104564.1-201ENST00000493028 407 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC021146.2-201ENST00000504736 556 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC008885.1-201ENST00000514930 301 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC103810.1-201ENST00000579873 453 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC006504.6-201ENST00000590142 199 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC138305.3-201ENST00000624988 240 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS50Q96JG6 AC091812.1-201ENST00000432235 1948 ntBASIC2.89□□□□□ -1.95
VPS50Q96JG6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS50Q96JG6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
VPS50Q96JG6 RNU4-42P-201ENST00000364738 142 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS50Q96JG6 RNU6-639P-201ENST00000384074 107 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 MIR487A-201ENST00000385009 80 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 SNORA12.2-201ENST00000391040 156 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC244670.1-201ENST00000436879 112 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC099799.1-201ENST00000439809 192 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC009296.1-201ENST00000443146 155 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AL353705.4-201ENST00000449661 238 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC112771.1-201ENST00000463581 102 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 TOMM22P6-201ENST00000465035 409 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS50Q96JG6 SNORA25.10-201ENST00000515926 124 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 SNORA31.16-201ENST00000516773 139 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms