Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSH3Q8TE77 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 RNU6-859P-201ENST00000362728 107 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 SNORD50.1-201ENST00000362987 71 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 Y_RNA.152-201ENST00000363578 100 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 RNU6-336P-201ENST00000364891 107 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 RPS29P13-201ENST00000402041 169 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 HMGN2P30-201ENST00000423237 256 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 CBX3P6-201ENST00000430257 527 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 AL714022.1-201ENST00000439897 151 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 RPL21P2-201ENST00000440049 481 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 snoU109.2-201ENST00000459316 135 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 RPS26P21-201ENST00000475397 348 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 RPL22P13-201ENST00000493291 347 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 AC093852.1-201ENST00000503587 266 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 FTX_3.1-201ENST00000610451 147 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 U2.21-201ENST00000637295 81 ntBASIC3.27□□□□□ -1.89
SSH3Q8TE77 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSH3Q8TE77 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSH3Q8TE77 Y_RNA.210-201ENST00000364161 110 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 Z98749.2-208ENST00000381646 500 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 Y_RNA.512-201ENST00000384518 102 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 Y_RNA.556-201ENST00000384677 113 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 AC092423.1-201ENST00000430165 186 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 RNU6-377P-201ENST00000515965 102 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 RNU6-1183P-201ENST00000517054 60 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 MIR3668-201ENST00000582138 75 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 VN1R91P-201ENST00000594377 169 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 AL355598.1-201ENST00000604169 202 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 AC090425.1-201ENST00000610007 140 ntBASIC3.26□□□□□ -1.89
SSH3Q8TE77 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.26□□□□□ -1.89
SSH3Q8TE77 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSH3Q8TE77 MTND5P7-201ENST00000413558 1798 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC138915.1-201ENST00000565427 1685 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSH3Q8TE77 Y_RNA.188-201ENST00000363952 111 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 SNORD21-201ENST00000383953 95 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 RNU6-700P-201ENST00000391043 107 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC007098.1-201ENST00000420122 367 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 MTATP6P7-201ENST00000453315 681 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 RNU7-169P-201ENST00000459456 61 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 RPL30P10-201ENST00000488148 337 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 RPS27P26-201ENST00000494583 239 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 Y_RNA.668-201ENST00000516233 93 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC144568.1-201ENST00000520139 137 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 MYL12BP1-201ENST00000569826 507 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC007336.1-201ENST00000576365 3828 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC020895.1-201ENST00000595362 272 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC002064.3-201ENST00000623448 346 ntBASIC3.25□□□□□ -1.89
SSH3Q8TE77 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.25□□□□□ -1.89
SSH3Q8TE77 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSH3Q8TE77 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-227P-201ENST00000362865 103 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-778P-201ENST00000363269 103 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 SNORA5B-201ENST00000363786 132 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-1318P-201ENST00000365389 103 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-784P-201ENST00000384330 106 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 Y_RNA.510-201ENST00000384511 114 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-658P-201ENST00000384606 106 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-1222P-201ENST00000384615 107 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RNU6-907P-201ENST00000390924 102 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 RPL21P1-201ENST00000399532 476 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 U3.37-201ENST00000408528 213 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 AC073910.1-201ENST00000445047 438 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 OSTCP8-201ENST00000445117 448 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 OR2AQ1P-201ENST00000451972 200 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 MTCO3P8-201ENST00000453691 755 ntBASIC3.24□□□□□ -1.89
SSH3Q8TE77 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.24□□□□□ -1.89
SSH3Q8TE77 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms