Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-529P-201ENST00000363383 104 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 U3.13-201ENST00000364804 214 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 SNORD32A-201ENST00000364805 84 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU1-109P-201ENST00000383960 147 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-43P-201ENST00000384302 107 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-790P-201ENST00000384479 105 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 MIR521-1-201ENST00000384902 87 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-1106P-201ENST00000390845 107 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC022028.1-201ENST00000412054 408 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC074085.1-201ENST00000413598 418 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RPL30P4-201ENST00000429309 333 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 USP9YP30-201ENST00000430729 455 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AL133396.1-201ENST00000432048 687 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RPS15AP28-201ENST00000435088 386 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC093019.1-201ENST00000443135 252 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 IFNA11P-201ENST00000446352 526 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RPL39P29-201ENST00000447779 157 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC107399.1-201ENST00000451226 265 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 PCMTD1P1-201ENST00000455560 355 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-1213P-201ENST00000517075 94 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 HSPE1P18-201ENST00000517602 280 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RAB11AP2-201ENST00000545905 639 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC004486.1-201ENST00000546846 233 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC079598.5-201ENST00000547460 117 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 AC016727.1-205ENST00000605437 569 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 LARP7P1-201ENST00000605576 316 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RPL23AP88-201ENST00000605759 454 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RNU6-91P-201ENST00000607774 107 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 MIR1302-1-201ENST00000637932 143 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 MTND4P27-201ENST00000450813 1354 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RNU1-72P-201ENST00000362976 153 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RNU6-933P-201ENST00000384424 107 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 MIR186-201ENST00000384988 86 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 MIR764-201ENST00000390811 85 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RNU2-23P-201ENST00000410545 195 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RNU6-1245P-201ENST00000411130 106 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RPL19P1-201ENST00000411635 428 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RPL37P10-201ENST00000412884 288 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 U8.21-201ENST00000459536 136 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC116337.1-201ENST00000509680 687 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC107222.1-201ENST00000510899 637 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC026782.1-201ENST00000512952 449 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AP005902.1-201ENST00000521358 186 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 VN1R107P-201ENST00000601784 209 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC073410.2-201ENST00000603240 332 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC124303.1-201ENST00000605703 360 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC019193.3-201ENST00000609144 554 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 AL449363.1-201ENST00000617815 186 ntBASIC1.78□□□□□ -2.12
LINC01006Q8NI28 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01006Q8NI28 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
LINC01006Q8NI28 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-1010P-201ENST00000362757 107 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-227P-201ENST00000362865 103 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 SNORD114-19-201ENST00000363072 75 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-486P-201ENST00000363116 107 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 Y_RNA.123-201ENST00000363338 102 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 SNORA36A-201ENST00000384221 132 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-842P-201ENST00000384269 107 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-601P-201ENST00000384540 107 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 MIR221-201ENST00000385135 110 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNA5SP390-201ENST00000410191 113 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU2-41P-201ENST00000410991 178 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AP000275.1-201ENST00000411943 390 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AC097463.2-201ENST00000421074 142 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AC018634.1-201ENST00000437554 401 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AC080013.2-201ENST00000460866 323 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01006Q8NI28 AC023141.11-201ENST00000508864 202 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNA5SP112-201ENST00000515937 99 ntBASIC1.77□□□□□ -2.13
LINC01006Q8NI28 RNU6-1016P-201ENST00000516689 94 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms