Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 C1DP1-201ENST00000426049 402 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 USP9YP11-201ENST00000427537 717 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPEP5-201ENST00000441137 268 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 BTBD7P2-201ENST00000441962 620 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6-965P-201ENST00000516721 96 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC023050.3-201ENST00000541142 333 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC008752.3-201ENST00000588113 712 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL359999.1-201ENST00000604513 294 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.46-201ENST00000362695 102 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-78P-201ENST00000362897 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MIR608-201ENST00000384820 100 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL603865.2-201ENST00000401679 213 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 TXNL1P1-201ENST00000429528 554 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTND2P20-201ENST00000440805 661 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC093899.1-201ENST00000457984 376 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU7-90P-201ENST00000459216 62 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC103851.1-201ENST00000506833 274 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC105417.1-201ENST00000514691 285 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNA5SP503-201ENST00000517047 117 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTND4LP25-201ENST00000570218 163 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.804-201ENST00000615262 101 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL158163.2-201ENST00000619110 700 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL136313.1-201ENST00000624804 202 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SNORD114-19-201ENST00000363072 75 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 EIF4E2P1-201ENST00000393781 255 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTND5P15-201ENST00000434246 349 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL031274.1-201ENST00000450334 232 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTCO3P27-201ENST00000514397 196 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-334P-201ENST00000517072 102 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTRNR2L2-201ENST00000604882 87 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC008945.2-201ENST00000606056 604 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNY4P24-201ENST00000362735 96 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-655P-201ENST00000362858 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-97P-201ENST00000363387 104 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNA5SP493-201ENST00000364115 91 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SNORD49B-201ENST00000365172 72 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SNORA40.2-201ENST00000390847 128 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SNORA12-201ENST00000391162 147 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTCO1P27-201ENST00000448269 226 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNVU1-2-201ENST00000516326 135 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-197P-201ENST00000516680 100 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 IGLVI-20-201ENST00000519296 130 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC024060.1-201ENST00000607052 494 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-188P-201ENST00000364207 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MIR200A-201ENST00000384875 90 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNA5SP390-201ENST00000410191 113 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNA5SP118-201ENST00000410385 109 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC006366.1-201ENST00000422002 759 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC013470.1-201ENST00000453438 462 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-377P-201ENST00000515965 102 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.687-201ENST00000516558 91 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.700-201ENST00000516806 100 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC107304.1-201ENST00000604229 296 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MIR8074-201ENST00000615081 81 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC068880.4-201ENST00000623082 495 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC092656.1-203ENST00000624134 423 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-511P-201ENST00000363496 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.472-201ENST00000384322 102 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL136310.1-201ENST00000404926 654 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 VPS26BP1-201ENST00000417155 755 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL590135.1-201ENST00000422215 156 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC019205.3-201ENST00000424573 156 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC016700.2-201ENST00000446011 156 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC015911.1-201ENST00000495111 156 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ACA64.5-201ENST00000516207 127 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-581P-201ENST00000516214 105 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.689-201ENST00000516589 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTND1P15-201ENST00000579262 949 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC112204.3-201ENST00000623822 332 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-30P-201ENST00000384561 107 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL034345.1-201ENST00000407768 123 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 PIGPP2-201ENST00000411569 458 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SKA2P1-201ENST00000425592 390 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms