Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.64-201ENST00000362845 102 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 RNU6-234P-201ENST00000365229 104 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.498-201ENST00000384460 102 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 SNORD115-46-201ENST00000390982 71 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 MIR1302-6-201ENST00000408466 90 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC004866.1-201ENST00000411748 78 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC096920.1-201ENST00000423991 241 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC244505.4-201ENST00000434905 287 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC005002.2-201ENST00000438228 269 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC006011.1-201ENST00000442758 349 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 SSXP5-201ENST00000443473 287 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 RBMY2UP-201ENST00000453474 324 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 HMGN1P18-201ENST00000457642 277 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 snoU13.22-201ENST00000459428 104 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 UQCRHP4-201ENST00000471686 272 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC117440.1-201ENST00000474107 571 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC104027.1-201ENST00000521887 300 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AK6P2-201ENST00000549020 471 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 RRN3P3-201ENST00000549207 578 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AC018448.1-201ENST00000552843 316 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 MIR4300-201ENST00000581016 96 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 AL357075.2-201ENST00000614906 189 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3□□□□□ -1.93
CLRN3Q8NCR9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CLRN3Q8NCR9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CLRN3Q8NCR9 RNU6-546P-201ENST00000383991 107 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 SNORA70F-201ENST00000384142 135 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.461-201ENST00000384263 103 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RNU6-574P-201ENST00000384265 107 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.512-201ENST00000384518 102 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 MIR300-201ENST00000401138 83 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AL031121.1-201ENST00000406553 254 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 SNORA11F-201ENST00000408237 128 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC003685.2-201ENST00000422795 395 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC011998.1-201ENST00000433403 117 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AL445687.1-201ENST00000439946 251 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC073264.2-201ENST00000448886 166 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RPS29P22-201ENST00000472363 168 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC022616.8-201ENST00000533569 253 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC136932.1-201ENST00000574771 208 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC025627.2-201ENST00000576220 160 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC007448.1-201ENST00000582714 234 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC005176.2-201ENST00000596933 147 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 AC008873.1-201ENST00000625051 138 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLRN3Q8NCR9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC079741.1-201ENST00000321498 212 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RNU6-626P-201ENST00000363354 107 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RNU6-806P-201ENST00000365147 105 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RNU2-32P-201ENST00000411193 191 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC016769.2-201ENST00000414815 475 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC092427.1-202ENST00000430569 476 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 ARL5AP4-201ENST00000430731 512 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC074290.1-201ENST00000448883 135 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 NDUFB4P10-201ENST00000452541 359 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RPS29P2-201ENST00000479278 136 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AF213884.1-201ENST00000488102 463 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RAC1P2-201ENST00000511164 579 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 RNU1-117P-201ENST00000517041 158 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AP006245.1-201ENST00000522549 120 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AL137849.1-201ENST00000604767 169 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC107871.2-201ENST00000612894 502 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC006133.1-201ENST00000617106 264 ntBASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLRN3Q8NCR9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms