Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC013470.1-201ENST00000453438 462 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU7-138P-201ENST00000459479 64 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RPL30P12-201ENST00000474666 353 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 ANXA2P1-201ENST00000505539 926 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC025465.4-201ENST00000513422 638 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC069113.1-201ENST00000517763 267 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 SNRPGP17-201ENST00000603780 214 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 LARP7P1-201ENST00000605576 316 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AL008636.1-201ENST00000625038 1018 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 CBX3P1-201ENST00000325243 554 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR29B2-201ENST00000385055 81 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 RNU2-32P-201ENST00000411193 191 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MTND3P8-201ENST00000412909 339 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 DPH3P2-201ENST00000422618 250 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AL137159.1-201ENST00000452808 512 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 snoU13.14-201ENST00000459372 104 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 RNU4-49P-201ENST00000516080 140 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC087854.1-201ENST00000519706 414 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AP005597.4-201ENST00000526762 229 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 SCOCP1-201ENST00000554676 349 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC233702.2-202ENST00000562547 291 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR4742-201ENST00000581069 85 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC100830.2-201ENST00000581636 240 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC005730.3-201ENST00000583067 366 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 MIR3942-201ENST00000585264 109 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 UBE2V2P2-201ENST00000587677 504 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AC023043.2-201ENST00000589678 1026 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AL357078.3-201ENST00000607528 618 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 AL138726.1-201ENST00000614873 333 ntBASIC2.17□□□□□ -2.06
RTL3Q8N8U3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL3Q8N8U3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 RNU6-128P-201ENST00000383976 107 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 RNU6-546P-201ENST00000383991 107 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 SNORD56-201ENST00000413522 71 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 VN1R36P-201ENST00000414936 291 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AL359672.1-201ENST00000442302 409 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AC091951.2-201ENST00000500762 203 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 HMGB1P35-201ENST00000503360 598 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 MTCYBP40-201ENST00000509390 1135 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 RNU6-256P-201ENST00000516747 97 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 MIR3672-201ENST00000584290 82 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 AL022345.1-201ENST00000607292 135 ntBASIC2.16□□□□□ -2.06
RTL3Q8N8U3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTL3Q8N8U3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
RTL3Q8N8U3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
RTL3Q8N8U3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 U3.13-201ENST00000364804 214 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 SNORD81.2-201ENST00000365153 76 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 MIR450B-201ENST00000401182 78 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 AL117339.3-201ENST00000418733 162 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 USP9YP8-201ENST00000441913 500 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 RPL32P28-201ENST00000443577 397 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 RPL39P29-201ENST00000447779 157 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 AMD1P1-201ENST00000457220 922 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 TRBV12-1-201ENST00000479785 344 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 AC107222.1-201ENST00000510899 637 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 RNU6-875P-201ENST00000516488 106 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 RNU6-1088P-201ENST00000516850 104 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
RTL3Q8N8U3 U4.7-201ENST00000638126 106 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms