Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC023141.11-201ENST00000508864 202 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 RNU6-307P-201ENST00000516743 106 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC021231.3-201ENST00000558497 370 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC005899.2-201ENST00000584353 90 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC069294.1-201ENST00000608397 350 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AL669831.3-213ENST00000636676 183 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 MTND4P27-201ENST00000450813 1354 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 MTND5P9-201ENST00000503854 1755 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.58-201ENST00000362807 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.154-201ENST00000363624 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNA5SP68-201ENST00000363885 119 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNY3P1-201ENST00000365085 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNA5SP126-201ENST00000365092 109 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNY3-201ENST00000365484 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.473-201ENST00000384333 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 SNORA26.3-201ENST00000391119 136 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AL590135.1-201ENST00000422215 156 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC019205.3-201ENST00000424573 156 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC008267.5-201ENST00000424928 265 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 USMG5P1-201ENST00000425964 177 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC016700.2-201ENST00000446011 156 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AL513124.1-201ENST00000450410 614 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RPS3P1-201ENST00000456781 192 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.653-201ENST00000459091 95 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 SNORD19B-201ENST00000459623 84 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RPL7P42-201ENST00000481005 679 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC015911.1-201ENST00000495111 156 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 MIR5571-201ENST00000577998 113 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 MIR5696-201ENST00000578474 85 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC105245.1-201ENST00000581934 244 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC009318.2-201ENST00000610917 651 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC133104.2-201ENST00000615272 193 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 SNORA43.4-201ENST00000629559 138 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 AC243829.7-201ENST00000633081 225 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 MTND4LP32-201ENST00000636111 270 ntBASIC2.43□□□□□ -2.02
BEST3Q8N1M1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
BEST3Q8N1M1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 MTND4P29-201ENST00000503122 1372 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RNU4-56P-201ENST00000364700 142 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RNU6-968P-201ENST00000384076 107 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RNU6-301P-201ENST00000384277 107 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RNY4P36-201ENST00000391116 96 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC079354.2-201ENST00000453523 154 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC073901.1-201ENST00000462471 408 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 FO393415.2-201ENST00000480085 343 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC140059.1-201ENST00000489238 361 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 HMGB1P35-201ENST00000503360 598 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC097473.1-201ENST00000508142 408 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC005741.1-201ENST00000511094 432 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RNU6-567P-201ENST00000516746 107 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 MIR3117-201ENST00000584034 78 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RPL30P11-203ENST00000598995 310 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AL356575.1-201ENST00000603008 283 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AL356280.1-201ENST00000603614 379 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 RPL23AP88-201ENST00000605759 454 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC126177.8-201ENST00000618339 1015 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 SNORD98-201ENST00000636377 67 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 AC233981.2-201ENST00000611524 1614 ntBASIC2.42□□□□□ -2.02
BEST3Q8N1M1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.42□□□□□ -2.02
BEST3Q8N1M1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.404-201ENST00000383978 102 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 SNORD116-29-201ENST00000384516 83 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 AL513328.1-201ENST00000446460 224 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.41□□□□□ -2.02
BEST3Q8N1M1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
BEST3Q8N1M1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms