Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ELOCP5-201ENST00000604924 333 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RMST_3.1-201ENST00000611651 109 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC090517.2-201ENST00000614966 680 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 DUXAP9-208ENST00000622815 614 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC098679.4-201ENST00000624241 654 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SNORD98-201ENST00000636377 67 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC073869.6-201ENST00000640656 341 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AP000560.1-201ENST00000624150 1937 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 SNORA3A-201ENST00000364113 130 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-877P-201ENST00000383868 107 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-214P-201ENST00000384130 107 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-332P-201ENST00000391193 108 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RNA5SP338-201ENST00000410495 85 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RN7SKP284-201ENST00000411002 343 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 snoU13.26-201ENST00000459452 105 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC018868.1-201ENST00000491307 315 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC022447.4-201ENST00000504053 364 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC092436.3-201ENST00000511788 257 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC118273.2-201ENST00000532092 465 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC009127.3-201ENST00000570531 403 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 MIR3136-201ENST00000583498 78 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AL034555.1-201ENST00000604816 211 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC104458.1-201ENST00000608243 463 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 FAM157A-202ENST00000615155 405 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC063943.3-201ENST00000615562 356 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 AC012640.5-201ENST00000623897 319 ntBASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.8□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-254P-201ENST00000363377 107 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-944P-201ENST00000364023 107 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-534P-201ENST00000364877 106 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-546P-201ENST00000383991 107 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RN7SKP61-201ENST00000410642 295 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU2-32P-201ENST00000411193 191 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-373P-201ENST00000411247 98 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AP000275.1-201ENST00000411943 390 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AL590135.1-201ENST00000422215 156 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC019205.3-201ENST00000424573 156 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RPL23AP95-201ENST00000426806 265 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC078809.1-201ENST00000427601 140 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 HMGN2P3-201ENST00000433603 273 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 HMGN2P5-201ENST00000436882 273 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC016700.2-201ENST00000446011 156 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC015911.1-201ENST00000495111 156 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC016632.1-201ENST00000503994 196 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 SNORA4.4-201ENST00000515921 135 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-718P-201ENST00000516166 105 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-612P-201ENST00000516909 102 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 TRAV32-201ENST00000553993 340 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC007375.1-201ENST00000554513 578 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 MIR3126-201ENST00000577443 74 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC018889.1-201ENST00000605372 397 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC068944.2-201ENST00000610373 403 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 MIR3688-2-201ENST00000636963 87 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 MTND4P23-201ENST00000447723 1363 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 AC027514.1-201ENST00000588561 1603 ntBASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.79□□□□□ -2.12
C9orf40Q8IXQ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 SNORD113-7-201ENST00000363762 77 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-192P-201ENST00000391253 100 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 MIR1289-2-201ENST00000408360 111 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 RNU2-20P-201ENST00000410425 191 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AL133396.1-201ENST00000432048 687 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AMD1P1-201ENST00000457220 922 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 U8.21-201ENST00000459536 136 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 RPL9P9-202ENST00000466501 579 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AC092989.1-201ENST00000481235 277 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AC091874.1-201ENST00000511402 339 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 SNORA31.16-201ENST00000516773 139 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms