Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MTND2P33-201ENST00000506452 1031 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RBBP4P6-201ENST00000508098 202 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RNU1-117P-201ENST00000517041 158 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC105185.1-201ENST00000518705 535 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AP002001.1-203ENST00000534002 267 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 CR383656.8-201ENST00000549046 145 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC092325.1-201ENST00000566449 554 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC025678.1-201ENST00000567861 338 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RNU6-94P-201ENST00000607728 107 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AL357075.2-201ENST00000614906 189 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RNY4P16-201ENST00000364768 94 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 RNU6-359P-201ENST00000365466 108 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 MIR593-201ENST00000384856 100 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 MTCO2P5-201ENST00000422621 426 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 COX7BP2-201ENST00000437976 242 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 MTCO3P17-201ENST00000443775 513 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 SNORA25.18-201ENST00000607153 114 ntBASIC-0.68□□□□□ -2.52
LINC00643Q86TS7 SNORA9.1-201ENST00000362412 131 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 SNORA12-201ENST00000391162 147 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 SNORA40C-201ENST00000391285 128 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 MIR1827-201ENST00000408549 66 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 RNU6-994P-201ENST00000410507 111 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 BX119904.4-201ENST00000424402 301 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC010154.1-201ENST00000425857 269 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 MED13P1-201ENST00000428342 171 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 RNU6-714P-201ENST00000516963 103 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC005176.2-201ENST00000596933 147 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 MIR6079-201ENST00000635807 62 ntBASIC-0.69□□□□□ -2.52
LINC00643Q86TS7 RNU6-222P-201ENST00000362438 107 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 RNU6-166P-201ENST00000384371 107 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 RNA5SP63-201ENST00000391225 112 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 ISCA1P6-201ENST00000427740 390 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AL133217.1-201ENST00000450980 425 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AC119751.5-201ENST00000514077 770 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AC023538.1-201ENST00000534576 736 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AL137100.2-201ENST00000555786 315 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 MIR3945-201ENST00000581853 98 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AP002360.4-201ENST00000606980 481 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 RNU4-5P-201ENST00000607255 135 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 SEPT14P17-201ENST00000617978 177 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AL513423.1-201ENST00000621695 132 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 AP000943.4-201ENST00000622912 357 ntBASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.7□□□□□ -2.52
LINC00643Q86TS7 SNORD118-201ENST00000363593 134 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC010531.2-201ENST00000465012 153 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC091874.1-201ENST00000511402 339 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC022868.1-201ENST00000517767 391 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC234772.3-201ENST00000602277 528 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AL031775.1-201ENST00000607014 887 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC243773.3-201ENST00000613270 256 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 AC067863.3-201ENST00000624172 122 ntBASIC-0.71□□□□□ -2.52
LINC00643Q86TS7 RNU6-199P-201ENST00000362954 107 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 RNU6-839P-201ENST00000363347 108 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 RNA5SP325-201ENST00000363756 130 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 RNU6-114P-201ENST00000384704 105 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 RNA5SP109-201ENST00000391010 116 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 Y_RNA.595-201ENST00000410403 105 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 DPRXP1-201ENST00000426312 460 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 RNU6-143P-201ENST00000516942 93 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 AC010620.1-201ENST00000601088 1102 ntBASIC-0.72□□□□□ -2.52
LINC00643Q86TS7 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.73□□□□□ -2.53
LINC00643Q86TS7 RNU6-932P-201ENST00000391108 106 ntBASIC-0.73□□□□□ -2.53
LINC00643Q86TS7 MTCO2P31-201ENST00000402702 684 ntBASIC-0.73□□□□□ -2.53
LINC00643Q86TS7 MIR1276-201ENST00000408707 83 ntBASIC-0.73□□□□□ -2.53
LINC00643Q86TS7 AC019070.1-201ENST00000415008 1024 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms