Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.473-201ENST00000384333 102 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 MTCYBP4-201ENST00000401524 249 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC138623.1-201ENST00000418060 216 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 OSTCP8-201ENST00000445117 448 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 UBE2V1P7-201ENST00000446395 340 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 SNRPGP7-201ENST00000469016 106 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 APOOP3-201ENST00000536787 586 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 MIR4273-201ENST00000582824 84 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 VN1R107P-201ENST00000601784 209 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC090574.1-201ENST00000623186 233 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.1□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.2-201ENST00000362330 96 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-227P-201ENST00000362865 103 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.140-201ENST00000363474 103 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-694P-201ENST00000364071 147 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 SNORD116-29-201ENST00000384516 83 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 MIR544A-201ENST00000384855 91 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 U8.13-201ENST00000390842 128 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 SNORA75.4-201ENST00000391278 119 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RPL30P15-201ENST00000457129 321 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 SNORD5.1-201ENST00000458800 75 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RNU7-152P-201ENST00000458982 64 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 SNORD19B-201ENST00000459623 84 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 MRPS36P2-201ENST00000512569 299 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AC026782.1-201ENST00000512952 449 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RNU5B-3P-201ENST00000516601 115 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 GLYCAM1-201ENST00000546596 285 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 MIR4719-201ENST00000585233 84 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AL050343.2-201ENST00000607338 280 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AC009229.3-201ENST00000608056 282 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 MIR8076-201ENST00000611401 83 ntBASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
KRT28Q7Z3Y7 AC006026.1-201ENST00000444025 1803 ntBASIC3.09□□□□□ -1.92
KRT28Q7Z3Y7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.460-201ENST00000384255 102 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-692P-201ENST00000384496 107 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 RPS20P15-201ENST00000412792 311 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AL133396.1-201ENST00000432048 687 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC004383.1-201ENST00000438135 289 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC243964.1-201ENST00000441814 261 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.653-201ENST00000459091 95 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 RN7SL297P-201ENST00000483161 293 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC109446.1-201ENST00000566172 220 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC105137.2-201ENST00000569073 466 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AP000654.2-201ENST00000605633 586 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC096772.1-201ENST00000609146 564 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC133104.2-201ENST00000615272 193 ntBASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
KRT28Q7Z3Y7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1188P-201ENST00000363795 107 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNA5SP213-201ENST00000391031 106 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNY4P36-201ENST00000391116 96 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL23AP36-201ENST00000413895 458 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL23AP50-201ENST00000434149 455 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC007969.2-201ENST00000441891 191 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC007677.1-201ENST00000445757 515 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AP001324.2-201ENST00000461163 319 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL30P12-201ENST00000474666 353 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms