Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP68-201ENST00000363885 119 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 SNORD116-20-201ENST00000384529 92 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR181B1-201ENST00000385240 110 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 FTH1P15-201ENST00000406984 280 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-101P-201ENST00000410323 104 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC007098.1-201ENST00000420122 367 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL591043.1-201ENST00000432461 424 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL714022.1-201ENST00000439897 151 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 RN7SKP210-201ENST00000459176 261 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MTATP8P1-201ENST00000467115 207 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MRPL42P6-201ENST00000486397 371 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-911P-201ENST00000516523 104 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP148-201ENST00000516527 94 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC144568.1-201ENST00000520139 137 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL590705.4-201ENST00000532209 134 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 HSBP1P1-201ENST00000555205 166 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR5188-201ENST00000583467 113 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC060766.3-201ENST00000591442 263 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL356157.2-201ENST00000605122 111 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AL021879.1-201ENST00000611756 288 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR1244-1-201ENST00000612829 85 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR1244-3-201ENST00000635744 85 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR1244-2-201ENST00000636449 85 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 MIR1244-4-202ENST00000636813 85 ntBASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3BQ7Z3V4 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP494-201ENST00000410653 129 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC074117.2-201ENST00000417130 397 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC007969.2-201ENST00000441891 191 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AL513124.1-201ENST00000450410 614 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 SRIP1-201ENST00000489235 288 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP282-201ENST00000516355 108 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 COX6CP5-201ENST00000527162 228 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC006199.1-201ENST00000548728 219 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC008269.2-201ENST00000561915 1105 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC104581.2-201ENST00000572227 430 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 MIR4503-201ENST00000582187 83 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 VN1R91P-201ENST00000594377 169 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AL355297.3-201ENST00000604082 446 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 AC097372.5-201ENST00000623665 376 ntBASIC3.29□□□□□ -1.88
UBE3BQ7Z3V4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP126-201ENST00000365092 109 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 SNORD14.1-201ENST00000365609 90 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP252-201ENST00000391131 119 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 MIR1252-201ENST00000408861 65 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL031659.1-201ENST00000447075 539 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL031183.1-201ENST00000457667 207 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 snoU13.28-201ENST00000459235 104 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 MIR3671-201ENST00000580455 88 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 HMGN2P15-201ENST00000585707 270 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AC024581.2-201ENST00000619986 252 ntBASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.28□□□□□ -1.88
UBE3BQ7Z3V4 AL161431.1-201ENST00000618966 4205 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-450P-201ENST00000364654 107 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 SNORD32A-201ENST00000364805 84 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.452-201ENST00000384202 108 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 RPL23AP95-201ENST00000426806 265 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC092423.1-201ENST00000430165 186 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC010099.1-201ENST00000455434 375 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 MED28P2-201ENST00000475771 317 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC010655.3-201ENST00000478818 450 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 RPL22P13-201ENST00000493291 347 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms