Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC090525.1-201ENST00000479116 478 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 HSPE1P6-201ENST00000479457 291 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC022493.1-201ENST00000492984 337 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC074198.2-201ENST00000508153 258 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.68□□□□□ -1.98
USP43Q70EL4 SNORA31.8-201ENST00000516327 108 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.68□□□□□ -1.98
USP43Q70EL4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.68□□□□□ -1.98
USP43Q70EL4 MED28P6-201ENST00000558776 231 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 MIR548AC-201ENST00000585049 88 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.68□□□□□ -1.98
USP43Q70EL4 AC073410.2-201ENST00000603240 332 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 RNU6-85P-201ENST00000605989 107 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.68□□□□□ -1.98
USP43Q70EL4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 RMST_4.1-201ENST00000616886 107 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC021753.1-201ENST00000635724 168 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.67□□□□□ -1.98
USP43Q70EL4 AP003122.5-201ENST00000527668 3766 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 AL391987.6-201ENST00000305671 199 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 Y_RNA.81-201ENST00000362997 102 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 RNY1P16-201ENST00000363063 111 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 RNU6-704P-201ENST00000364162 103 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 SNORD50B-201ENST00000364995 70 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 RNU6-378P-201ENST00000384324 107 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 SNORD73A-201ENST00000386062 65 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 AL513331.1-201ENST00000411908 397 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.67□□□□□ -1.98
USP43Q70EL4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.67□□□□□ -1.98
USP43Q70EL4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.67□□□□□ -1.98
USP43Q70EL4 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 AC104576.1-201ENST00000524225 88 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.67□□□□□ -1.98
USP43Q70EL4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.67□□□□□ -1.98
USP43Q70EL4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP43Q70EL4 AL158827.2-201ENST00000602494 330 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.67□□□□□ -1.98
USP43Q70EL4 AL691447.3-201ENST00000635020 330 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 GABRG2-229ENST00000641017 3628 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 AC004944.1-201ENST00000517807 3059 ntBASIC2.67□□□□□ -1.98
USP43Q70EL4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USP43Q70EL4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
USP43Q70EL4 UBE2L2-201ENST00000254302 429 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RNU6-799P-201ENST00000363567 107 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP43Q70EL4 SNORD115-46-201ENST00000390982 71 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR1298-201ENST00000408783 112 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RN7SKP220-201ENST00000410611 288 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AL030996.1-201ENST00000411430 235 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.66□□□□□ -1.98
USP43Q70EL4 Z96811.1-201ENST00000445880 108 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.66□□□□□ -1.98
USP43Q70EL4 RNU7-169P-201ENST00000459456 61 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.66□□□□□ -1.98
USP43Q70EL4 AC006445.1-201ENST00000491925 405 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RPS23P5-201ENST00000495419 428 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.66□□□□□ -1.98
USP43Q70EL4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.66□□□□□ -1.98
USP43Q70EL4 RNU1-86P-201ENST00000516108 154 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SNORA31.6-201ENST00000516241 130 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RNU6-346P-201ENST00000516288 111 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RNU1-107P-201ENST00000516617 154 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 RNA5SP471-201ENST00000516971 106 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR5701-3-201ENST00000578890 82 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR5701-1-201ENST00000585138 82 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AL390123.1-201ENST00000603216 237 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MZT1P2-201ENST00000604387 248 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR7106-201ENST00000612419 65 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR1244-1-201ENST00000612829 85 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR5701-2-201ENST00000615634 82 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AL138880.2-201ENST00000616214 239 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR1244-3-201ENST00000635744 85 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR1244-2-201ENST00000636449 85 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 Z99571.1-201ENST00000636677 394 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 MIR1244-4-202ENST00000636813 85 ntBASIC2.66□□□□□ -1.98
USP43Q70EL4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP43Q70EL4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP43Q70EL4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP43Q70EL4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
USP43Q70EL4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.65□□□□□ -1.98
USP43Q70EL4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
USP43Q70EL4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.65□□□□□ -1.99
USP43Q70EL4 Y_RNA.76-201ENST00000362931 109 ntBASIC2.65□□□□□ -1.99
USP43Q70EL4 RNU6-173P-201ENST00000364215 104 ntBASIC2.65□□□□□ -1.99
USP43Q70EL4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.65□□□□□ -1.99
USP43Q70EL4 SNORD50.2-201ENST00000365465 70 ntBASIC2.65□□□□□ -1.99
USP43Q70EL4 RNY1P5-201ENST00000383890 115 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms