Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.59□□□□□ -1.84
RNF111Q6ZNA4 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.84
RNF111Q6ZNA4 AC004944.1-201ENST00000517807 3059 ntBASIC3.59□□□□□ -1.84
RNF111Q6ZNA4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.84
RNF111Q6ZNA4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF111Q6ZNA4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AL133383.2-201ENST00000622958 2336 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 RNU1-64P-201ENST00000365443 163 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 SNORA3.3-201ENST00000408712 125 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC010401.1-201ENST00000463867 348 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 HMGB3P3-201ENST00000510526 400 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC026402.1-201ENST00000513642 170 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC022695.1-201ENST00000522089 237 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC115990.1-201ENST00000526957 301 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 CYP4A27P-201ENST00000567218 190 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 MIR3609-201ENST00000582661 80 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 DEFB117-201ENST00000602356 141 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AL162713.1-201ENST00000604480 262 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 HSPE1P7-201ENST00000604681 321 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 AC084757.4-201ENST00000616350 526 ntBASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF111Q6ZNA4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 MIR30E-201ENST00000362104 92 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 PTMAP5-201ENST00000393073 333 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 U3.39-201ENST00000408569 239 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 RN7SKP53-201ENST00000411337 315 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 AIG1P1-201ENST00000503376 148 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 AP002001.1-203ENST00000534002 267 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 AL713866.2-201ENST00000603579 219 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 AC007496.3-201ENST00000624987 3443 ntBASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF111Q6ZNA4 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AC002543.1-201ENST00000299783 1954 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 RNA5SP42-201ENST00000364278 115 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 RNU6-245P-201ENST00000384020 107 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 MIR30B-201ENST00000384850 88 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AL357139.1-201ENST00000407792 426 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AL591419.1-201ENST00000427423 339 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AC103975.1-201ENST00000482506 483 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 AC105137.2-201ENST00000569073 466 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 uc_338.32-201ENST00000615087 172 ntBASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF111Q6ZNA4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 RNU6-653P-201ENST00000363074 106 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AL591034.1-201ENST00000407447 340 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC023141.4-201ENST00000412031 328 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 BTF3P11-201ENST00000426582 477 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 HMGN2P16-201ENST00000456802 261 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC107626.1-201ENST00000471084 183 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 RNU1-61P-201ENST00000516107 151 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC106785.1-201ENST00000565935 262 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 MIR548AI-201ENST00000579940 88 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms