Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC027309.3-201ENST00000623419 351 ntBASIC3.68□□□□□ -1.82
CNKSR3Q6P9H4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.68□□□□□ -1.82
CNKSR3Q6P9H4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CNKSR3Q6P9H4 AC093908.1-201ENST00000623125 8092 ntBASIC3.68□□□□□ -1.82
CNKSR3Q6P9H4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-105P-201ENST00000363909 104 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 SNORD115-32-201ENST00000364079 82 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-959P-201ENST00000384671 107 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-21P-201ENST00000384710 107 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AL512844.2-201ENST00000433990 593 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 Z82210.1-201ENST00000440037 231 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AL078601.1-201ENST00000444542 271 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 SNORA27.4-201ENST00000516650 95 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RNA5SP290-201ENST00000517133 127 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AC008749.1-201ENST00000597650 306 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 RMST_6.1-201ENST00000611980 203 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 MIR6076-201ENST00000617521 113 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNKSR3Q6P9H4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 MIR410-201ENST00000362222 80 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 MIR422A-201ENST00000362286 90 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-626P-201ENST00000363354 107 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-961P-201ENST00000363893 105 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-72P-201ENST00000384285 79 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 MRPS10P1-201ENST00000448483 130 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AL353705.4-201ENST00000449661 238 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 SSXP4-201ENST00000451349 245 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RPL23AP3-201ENST00000453844 468 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AC097462.2-201ENST00000504623 481 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-479P-201ENST00000516348 105 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-567P-201ENST00000516746 107 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AC241585.2-209ENST00000638217 143 ntBASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.66□□□□□ -1.82
CNKSR3Q6P9H4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.65□□□□□ -1.82
CNKSR3Q6P9H4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RNA5SP197-201ENST00000363357 119 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 SNORD74.4-201ENST00000364129 80 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-20P-201ENST00000384106 107 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-131P-201ENST00000391144 107 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC096638.1-201ENST00000444678 216 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC009237.7-201ENST00000447357 229 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 UQCRBP2-201ENST00000447827 297 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC091874.1-201ENST00000511402 339 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RN7SKP49-201ENST00000516675 260 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 RNA5SP165-201ENST00000517142 115 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC068831.7-201ENST00000616954 363 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 AC073349.3-201ENST00000617616 186 ntBASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CNKSR3Q6P9H4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 SNORA80A-201ENST00000363922 136 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 RNU1-140P-201ENST00000365040 165 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-514P-201ENST00000384208 107 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 SNORA22C-201ENST00000384614 134 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 OOSP1P1-201ENST00000423265 274 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms