Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR491-201ENST00000384877 84 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 SNORA12-201ENST00000391162 147 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 RNU2-48P-201ENST00000410694 191 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AC096664.2-201ENST00000411843 406 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 GSTA11P-201ENST00000452866 669 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 CYP4A27P-201ENST00000567218 190 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AL359314.1-201ENST00000616913 261 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 AC126177.8-201ENST00000618339 1015 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-874P-201ENST00000362390 105 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 SNORD32B-201ENST00000364460 84 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.315-201ENST00000365117 102 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 MIR559-201ENST00000385188 96 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 RNA5SP494-201ENST00000410653 129 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 RPS26P42-201ENST00000413485 326 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AL590556.1-201ENST00000423231 483 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 CBX3P6-201ENST00000430257 527 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-567P-201ENST00000516746 107 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 MIR3923-201ENST00000579521 83 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 MIR5195-201ENST00000583555 115 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 AL442067.2-201ENST00000614033 363 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.96□□□□□ -1.94
PPP4R4Q6NUP7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 RNU4-9P-201ENST00000364951 139 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-546P-201ENST00000383991 107 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 RNU2-32P-201ENST00000411193 191 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 MTCO2P27-201ENST00000420740 428 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 AC236972.2-201ENST00000434979 310 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 AC110794.1-201ENST00000505816 425 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 AC005899.2-201ENST00000584353 90 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 MIR6733-201ENST00000635723 61 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 Z82209.1-201ENST00000422141 2135 ntBASIC2.95□□□□□ -1.94
PPP4R4Q6NUP7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 RNY1P16-201ENST00000363063 111 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.187-201ENST00000363918 113 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 SNORD115-32-201ENST00000364079 82 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 SNORA9-201ENST00000384215 133 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 SNORA12.2-201ENST00000391040 156 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC093303.1-201ENST00000514549 295 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 RNU1-104P-201ENST00000517280 175 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC034114.1-201ENST00000520293 285 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AL590705.4-201ENST00000532209 134 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC022616.8-201ENST00000533569 253 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 MIR5680-201ENST00000577577 84 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 MTND4P29-201ENST00000503122 1372 ntBASIC2.94□□□□□ -1.94
PPP4R4Q6NUP7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-1040P-201ENST00000383974 107 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 snoU13.30-201ENST00000458951 104 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 RN7SL807P-201ENST00000470923 297 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AC022493.2-201ENST00000506122 481 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AC104581.2-201ENST00000572227 430 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 SNORD14A-201ENST00000606526 91 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 AL132822.1-201ENST00000617063 513 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms