Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-137P-201ENST00000363680 108 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.428-201ENST00000384078 102 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 RNU6-541P-201ENST00000384709 110 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 MIR183-201ENST00000384958 110 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 MIR625-201ENST00000385047 85 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF220Q5VTB9 TOMM22P6-201ENST00000465035 409 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AC109925.1-201ENST00000478069 331 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF220Q5VTB9 SNORA67.7-201ENST00000516664 135 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 RNA5SP54-201ENST00000516951 92 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 SNORD116.3-201ENST00000517176 78 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AC044792.1-201ENST00000593294 196 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AL355297.2-201ENST00000604792 129 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AC006133.1-201ENST00000617106 264 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 U6.105-201ENST00000637379 88 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 AC000403.1-201ENST00000613696 3585 ntBASIC2.89□□□□□ -1.95
RNF220Q5VTB9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.394-201ENST00000383942 103 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 MIR23B-201ENST00000384832 97 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 SNORA48.7-201ENST00000391302 135 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 MTND1P14-201ENST00000427400 950 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 CBX3P6-201ENST00000430257 527 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AC007215.1-201ENST00000464893 276 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 RPS29P2-201ENST00000479278 136 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 RNU7-4P-201ENST00000516961 62 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AC109329.2-201ENST00000519658 482 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AC004486.1-201ENST00000546846 233 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
RNF220Q5VTB9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF220Q5VTB9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.112-201ENST00000363250 102 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.128-201ENST00000363391 112 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNORD115-8-201ENST00000363856 82 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNORD32B-201ENST00000364460 84 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.252-201ENST00000364556 101 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNORD115-38-201ENST00000365037 82 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNORA7.4-201ENST00000384249 137 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 RNU4-47P-201ENST00000410876 114 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC105758.1-201ENST00000506038 399 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNORA48.11-201ENST00000517015 89 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 SNRPGP18-201ENST00000553000 214 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MIR1244-1-201ENST00000612829 85 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MIR7975-201ENST00000619350 68 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 uc_338.22-201ENST00000622722 187 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 AC134503.1-201ENST00000633048 54 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MIR1244-3-201ENST00000635744 85 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MIR1244-2-201ENST00000636449 85 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MIR1244-4-202ENST00000636813 85 ntBASIC2.87□□□□□ -1.95
RNF220Q5VTB9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.106-201ENST00000363189 100 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 SNORA25.6-201ENST00000364121 118 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.314-201ENST00000365114 102 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.445-201ENST00000384168 102 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 U3.19-201ENST00000390893 196 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 SNORA12-201ENST00000391162 147 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 MIR1294-201ENST00000408503 142 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 MRPS18CP6-201ENST00000423587 223 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC018865.2-201ENST00000423631 129 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AL137792.2-201ENST00000443484 235 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC007677.1-201ENST00000445757 515 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 Z75741.1-201ENST00000446793 314 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 RN7SL863P-201ENST00000462370 296 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC091153.1-201ENST00000466297 402 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.661-201ENST00000516003 99 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 RNU6-58P-201ENST00000517143 103 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC144568.1-201ENST00000520139 137 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms