Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL513124.1-201ENST00000450410 614 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC38Q502W7 AC021146.2-201ENST00000504736 556 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNU6-1016P-201ENST00000516689 94 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 AC093732.2-201ENST00000607950 274 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 AC099654.5-201ENST00000636479 350 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC38Q502W7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC38Q502W7 AC233981.2-201ENST00000611524 1614 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC38Q502W7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 SNORA5B-201ENST00000363786 132 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 RNU6-944P-201ENST00000364023 107 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 Y_RNA.482-201ENST00000384377 111 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 USP9YP30-201ENST00000430729 455 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC009238.1-201ENST00000442165 424 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC009237.6-201ENST00000446969 424 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 MTND5P20-201ENST00000448677 143 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC079354.2-201ENST00000453523 154 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC38Q502W7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC38Q502W7 MRPS36P4-201ENST00000534436 298 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC079600.2-201ENST00000550076 130 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC243960.4-201ENST00000600532 288 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC009318.2-201ENST00000610917 651 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 AC005520.5-201ENST00000613926 164 ntBASIC2.75□□□□□ -1.97
CCDC38Q502W7 MTND4P12-201ENST00000498999 1377 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 Z82209.1-201ENST00000422141 2135 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC38Q502W7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 Y_RNA.142-201ENST00000363491 102 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 MIR144-201ENST00000384886 86 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 RNU6-174P-201ENST00000410406 106 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 MIR4273-201ENST00000582824 84 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 AC018462.2-201ENST00000605375 395 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 AC092794.2-201ENST00000620933 563 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 MIR6852-201ENST00000621699 66 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC38Q502W7 MTND5P9-201ENST00000503854 1755 ntBASIC2.74□□□□□ -1.97
CCDC38Q502W7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC38Q502W7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC38Q502W7 RNU6-546P-201ENST00000383991 107 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 RNU6-601P-201ENST00000384540 107 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 SNORA80E-201ENST00000384744 137 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 RNA5SP494-201ENST00000410653 129 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 RNU2-32P-201ENST00000411193 191 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 MTND4LP11-201ENST00000422184 280 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 MTATP6P23-201ENST00000440153 476 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 AL353705.4-201ENST00000449661 238 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC091951.2-201ENST00000500762 203 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC026782.1-201ENST00000512952 449 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 Y_RNA.702-201ENST00000516843 96 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC109446.1-201ENST00000566172 220 ntBASIC2.73□□□□□ -1.97
CCDC38Q502W7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC38Q502W7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC38Q502W7 U3.9-201ENST00000363823 204 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 SNORD32B-201ENST00000364460 84 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 SNORA25B-201ENST00000365507 128 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 MIR208B-201ENST00000401172 77 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC38Q502W7 Y_RNA.635-201ENST00000459041 101 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC018868.1-201ENST00000491307 315 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC005741.1-201ENST00000511094 432 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 RNU6-875P-201ENST00000516488 106 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC105029.1-201ENST00000520250 669 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC022616.8-201ENST00000533569 253 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC025253.1-201ENST00000613623 543 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.72□□□□□ -1.97
CCDC38Q502W7 AC137590.2-201ENST00000619709 240 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms