Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 RPL21P75-201ENST00000396599 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 UBA52P6-201ENST00000399822 382 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 RPL21P28-201ENST00000401418 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL356057.3-201ENST00000402607 340 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL590556.1-201ENST00000423231 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 MTCO3P8-201ENST00000453691 755 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 RPL21P39-201ENST00000463605 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC087190.1-201ENST00000484462 480 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC107032.1-201ENST00000485945 480 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC132942.1-201ENST00000486753 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC093591.1-201ENST00000491435 481 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 RPL21P16-201ENST00000495531 483 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AC027288.2-201ENST00000553028 243 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 AL078596.1-201ENST00000624856 447 ntBASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP13A4Q4VNC1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 SNORD115-8-201ENST00000363856 82 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 SNORD115-38-201ENST00000365037 82 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 RNU1-139P-201ENST00000391307 165 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 CBX3P9-201ENST00000402326 552 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 RPS3AP12-201ENST00000443616 753 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 U8.22-201ENST00000459141 133 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AP000870.1-201ENST00000472927 406 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AL442163.3-201ENST00000554110 156 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC073657.2-201ENST00000605661 303 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC005520.5-201ENST00000613926 164 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 MIR7515-201ENST00000637837 67 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 AC010329.5-201ENST00000623497 2174 ntBASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ATP13A4Q4VNC1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 SNORA68.1-201ENST00000364537 132 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RNVU1-14-201ENST00000384770 164 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 MIR487A-201ENST00000385009 80 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 AL358176.2-201ENST00000425769 204 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 MTND3P2-201ENST00000438452 342 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RPS3P1-201ENST00000456781 192 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RPL23AP70-201ENST00000483361 460 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RNU6-58P-201ENST00000517143 103 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 RPS29P30-201ENST00000600975 111 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 AC096577.2-201ENST00000611455 153 ntBASIC3.28□□□□□ -1.88
ATP13A4Q4VNC1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 Y_RNA.27-201ENST00000362540 103 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 Y_RNA.153-201ENST00000363615 91 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RNU4-50P-201ENST00000364361 141 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RNA5SP267-201ENST00000364893 126 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 SNORA51.11-201ENST00000384442 131 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RNU6-1105P-201ENST00000384774 107 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 U3.19-201ENST00000390893 196 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 MIR208B-201ENST00000401172 77 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 MIR1252-201ENST00000408861 65 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 MICF-203ENST00000432679 129 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AL353705.1-201ENST00000433468 480 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 U8.20-201ENST00000459445 131 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 Y_RNA.715-201ENST00000517082 110 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AL117187.1-201ENST00000555482 181 ntBASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP13A4Q4VNC1 RNU4-15P-201ENST00000362613 141 ntBASIC3.26□□□□□ -1.89
ATP13A4Q4VNC1 RNU6-1309P-201ENST00000363305 108 ntBASIC3.26□□□□□ -1.89
ATP13A4Q4VNC1 Y_RNA.133-201ENST00000363428 110 ntBASIC3.26□□□□□ -1.89
ATP13A4Q4VNC1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.26□□□□□ -1.89
ATP13A4Q4VNC1 SNORA11.1-201ENST00000408133 129 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms