Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AC007395.1-201ENST00000451333 677 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 RPL18AP17-201ENST00000455326 198 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AP000797.1-201ENST00000478870 387 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 RNU6-947P-201ENST00000516264 106 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 SNORA43.2-201ENST00000516652 128 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 TPRKBP2-201ENST00000565969 475 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AC011195.1-201ENST00000578177 177 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 MIR4768-201ENST00000585270 74 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AL034555.1-201ENST00000604816 211 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AC097065.2-201ENST00000608159 533 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 MIR6718-201ENST00000616153 80 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 SNORD31B-201ENST00000364977 69 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 MIR140-201ENST00000385282 100 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 RNU6-856P-201ENST00000516959 98 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AC106038.2-201ENST00000520706 568 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AP003327.1-201ENST00000529684 127 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AL353778.1-201ENST00000603149 408 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 AC023932.2-201ENST00000603176 175 ntBASIC-0.13□□□□□ -2.43
CCDC58Q4VC31 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 RNA5SP219-201ENST00000390940 113 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 CALM2P3-201ENST00000400429 449 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AL034345.1-201ENST00000407768 123 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC060773.1-201ENST00000421698 310 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC000111.3-201ENST00000433478 193 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 RPL39P39-201ENST00000455840 151 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC022364.2-201ENST00000457963 554 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 SNORA62.5-201ENST00000516634 120 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC115990.1-201ENST00000526957 301 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AL078603.1-201ENST00000603824 313 ntBASIC-0.14□□□□□ -2.43
CCDC58Q4VC31 AC092268.1-201ENST00000342691 405 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 MIR412-201ENST00000362142 91 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 MIR103A1-201ENST00000362165 78 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 SNORA63.3-201ENST00000362682 132 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 RNA5SP264-201ENST00000363115 107 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 SNORD114-23-201ENST00000363536 72 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 RNU4-67P-201ENST00000364569 141 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC021146.8-201ENST00000507455 733 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC016957.1-201ENST00000534895 309 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AL136520.1-202ENST00000555494 763 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 MIR4514-201ENST00000581410 57 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC022893.3-201ENST00000607665 437 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC106754.2-201ENST00000623006 233 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 AC104985.3-201ENST00000623479 597 ntBASIC-0.15□□□□□ -2.43
CCDC58Q4VC31 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 MTCO1P3-201ENST00000429327 192 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 SNRPGP9-201ENST00000456025 225 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 SUMO2P5-201ENST00000506790 245 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AC011406.1-201ENST00000512440 370 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 RNA5SP220-201ENST00000516298 104 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 MTND2P7-201ENST00000521337 640 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 AC091805.2-201ENST00000603848 235 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 MIR371B-201ENST00000638082 66 ntBASIC-0.16□□□□□ -2.44
CCDC58Q4VC31 RNA5SP62-201ENST00000363457 110 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 MIR10A-201ENST00000385043 110 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 MIR1305-201ENST00000408300 86 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AL445305.1-201ENST00000432577 575 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC114878.1-201ENST00000441166 358 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC007969.2-201ENST00000441891 191 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC016256.1-201ENST00000547971 354 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AL138889.2-201ENST00000603883 242 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC231657.1-201ENST00000624313 397 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 AC004808.1-201ENST00000627671 721 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 MIR338-201ENST00000636369 67 ntBASIC-0.17□□□□□ -2.44
CCDC58Q4VC31 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms