Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 C8orf59P1-201ENST00000429930 303 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 MTND3P21-201ENST00000433774 331 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 MTND1P4-201ENST00000435196 415 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.95□□□□□ -2.1
PTCH1Q13635 CALM1P1-201ENST00000442082 433 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AC079448.1-201ENST00000449377 373 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 RPS29P1-201ENST00000465274 159 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 RNU6-506P-201ENST00000516553 94 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.95□□□□□ -2.1
PTCH1Q13635 AC087883.1-201ENST00000551882 391 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
PTCH1Q13635 AC107304.1-201ENST00000604229 296 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AC007684.1-201ENST00000609671 477 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AC092794.1-201ENST00000612734 582 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 MIR6767-201ENST00000637302 66 ntBASIC1.95□□□□□ -2.1
PTCH1Q13635 OR4G2P-201ENST00000328113 903 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RNU6-655P-201ENST00000362858 107 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RNU6-181P-201ENST00000363225 107 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 Y_RNA.296-201ENST00000364930 108 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RNU6-641P-201ENST00000384006 107 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 MIR520E-201ENST00000384867 87 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RNA5SP390-201ENST00000410191 113 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RPL31P35-201ENST00000431058 377 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 MTCO2P11-201ENST00000431069 680 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AL358934.1-201ENST00000432346 324 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 RPL23AP6-201ENST00000446637 472 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCH1Q13635 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.94□□□□□ -2.1
PTCH1Q13635 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PTCH1Q13635 MRPS17P9-201ENST00000511924 393 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCH1Q13635 RNU6-445P-201ENST00000516949 107 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AP003072.2-201ENST00000527756 676 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AL158209.2-201ENST00000619266 216 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 AC073534.2-201ENST00000620377 381 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 SEPT14P19-203ENST00000633205 211 ntBASIC1.94□□□□□ -2.1
PTCH1Q13635 SNORD14B-201ENST00000364533 90 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 SNORA20.2-201ENST00000383922 131 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 RNU6-39P-201ENST00000384344 107 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 MIR558-201ENST00000384920 94 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC096920.1-201ENST00000423991 241 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 MED13P1-201ENST00000428342 171 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AL353689.1-201ENST00000438895 199 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCH1Q13635 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCH1Q13635 C1DP4-201ENST00000455429 424 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 AC006512.1-201ENST00000468816 291 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 HMGB1P29-201ENST00000505659 499 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC022616.3-201ENST00000523940 148 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 ZNF519P2-201ENST00000557032 169 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCH1Q13635 TPRKBP2-201ENST00000565969 475 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.93□□□□□ -2.1
PTCH1Q13635 MIR5692A1-201ENST00000580523 69 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 MIR98-201ENST00000606724 119 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AF250324.2-201ENST00000608299 610 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
PTCH1Q13635 AC007792.1-201ENST00000623023 402 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 AC091932.3-201ENST00000624223 323 ntBASIC1.93□□□□□ -2.1
PTCH1Q13635 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCH1Q13635 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PTCH1Q13635 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.93□□□□□ -2.1
PTCH1Q13635 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PTCH1Q13635 RNU6-282P-201ENST00000365357 103 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 RNU6-622P-201ENST00000384272 103 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 MIR181A1-201ENST00000385026 110 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 MIR1304-201ENST00000408243 91 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC074117.2-201ENST00000417130 397 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 TIMM9P3-201ENST00000428659 274 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC133104.1-201ENST00000429100 218 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.92□□□□□ -2.1
PTCH1Q13635 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC010493.1-201ENST00000513479 292 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC090572.1-201ENST00000519251 160 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AP000763.2-201ENST00000540641 163 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.92□□□□□ -2.1
PTCH1Q13635 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.92□□□□□ -2.1
PTCH1Q13635 MTATP6P3-201ENST00000581686 676 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 FAM106DP-201ENST00000586416 501 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 U4.5-201ENST00000617137 123 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 MIR6863-201ENST00000636112 90 ntBASIC1.92□□□□□ -2.1
PTCH1Q13635 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
PTCH1Q13635 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.92□□□□□ -2.1
PTCH1Q13635 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PTCH1Q13635 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PTCH1Q13635 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
PTCH1Q13635 SNORA24.1-201ENST00000384401 135 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms