Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-333P-201ENST00000459117 107 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AC132942.1-201ENST00000486753 483 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.66□□□□□ -2.14
RAB40BQ12829 RPL9P6-201ENST00000492764 598 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RPL39P5-202ENST00000512505 151 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RAB40BQ12829 AL118558.2-201ENST00000556294 238 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AC109446.1-201ENST00000566172 220 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40BQ12829 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AL022345.1-201ENST00000607292 135 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AC103705.1-201ENST00000619013 241 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RAB40BQ12829 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RAB40BQ12829 Y_RNA.378-201ENST00000365652 113 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 RNU6-26P-201ENST00000383985 107 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 MTCO3P40-201ENST00000392516 676 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.65□□□□□ -2.15
RAB40BQ12829 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.65□□□□□ -2.15
RAB40BQ12829 Z83846.1-201ENST00000446798 265 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40BQ12829 AC107401.1-201ENST00000503426 685 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 MRPS17P9-201ENST00000511924 393 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.65□□□□□ -2.15
RAB40BQ12829 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40BQ12829 AC087854.1-201ENST00000519706 414 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 RNU6-323P-201ENST00000521915 107 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AC021231.3-201ENST00000558497 370 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40BQ12829 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AL078605.1-201ENST00000603529 500 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 CYP2C61P-201ENST00000604072 290 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 Z98751.3-201ENST00000604447 521 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AL357078.3-201ENST00000607528 618 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
RAB40BQ12829 AC124864.2-201ENST00000624736 186 ntBASIC1.65□□□□□ -2.15
RAB40BQ12829 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
RAB40BQ12829 U3.9-201ENST00000363823 204 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU6-234P-201ENST00000365229 104 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU4-20P-201ENST00000365601 151 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU6-160P-201ENST00000384591 107 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 SNORA64-201ENST00000384674 134 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RAB40BQ12829 RN7SKP32-201ENST00000410167 303 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNA5SP201-201ENST00000410316 124 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU2-2P-201ENST00000410396 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU2-16P-201ENST00000410712 136 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC244636.1-201ENST00000421152 228 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 OOSP1P1-201ENST00000423265 274 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40BQ12829 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40BQ12829 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU6-1037P-201ENST00000459571 107 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RPL23AP42-201ENST00000471152 471 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 Y_RNA.654-201ENST00000497848 106 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC008628.2-201ENST00000502605 298 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU1-41P-201ENST00000516161 162 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU1-48P-201ENST00000516400 162 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU6-567P-201ENST00000516746 107 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AP005597.4-201ENST00000526762 229 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.64□□□□□ -2.15
RAB40BQ12829 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.64□□□□□ -2.15
RAB40BQ12829 AC025423.5-201ENST00000550230 219 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC027807.1-201ENST00000559921 996 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.64□□□□□ -2.15
RAB40BQ12829 AL121757.2-201ENST00000611223 313 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.15-201ENST00000611544 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.16-201ENST00000613119 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.12-201ENST00000613778 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.20-201ENST00000613956 192 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.9-201ENST00000615427 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.11-201ENST00000616345 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.2-201ENST00000616535 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.3-201ENST00000617785 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.19-201ENST00000618602 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU2-1-201ENST00000618664 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.6-201ENST00000619225 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.5-201ENST00000619465 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 U2.10-201ENST00000620268 191 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 AC130454.1-201ENST00000622948 401 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40BQ12829 AL450472.1-202ENST00000637286 180 ntBASIC1.64□□□□□ -2.15
RAB40BQ12829 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
RAB40BQ12829 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 SNORA36A-201ENST00000384221 132 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 SNORA8-201ENST00000384574 139 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 CALM2P3-201ENST00000400429 449 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 HMGN2P18-201ENST00000450680 270 ntBASIC1.63□□□□□ -2.15
RAB40BQ12829 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40BQ12829 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms