Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-1009P-201ENST00000390996 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL356432.1-201ENST00000405809 419 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL117339.3-201ENST00000418733 162 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.84□□□□□ -2.11
CKAP4Q07065 AL365400.1-201ENST00000431854 640 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 HMGB1P18-201ENST00000438801 619 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 MTND4LP16-201ENST00000440828 295 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.84□□□□□ -2.11
CKAP4Q07065 MTCO1P29-201ENST00000496868 288 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AC116655.1-201ENST00000508324 901 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AC008526.1-201ENST00000509149 338 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 MTCYBP40-201ENST00000509390 1135 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 FGF7P4-201ENST00000509595 295 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.84□□□□□ -2.11
CKAP4Q07065 AC092436.3-201ENST00000511788 257 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-566P-201ENST00000516790 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AC025423.5-201ENST00000550230 219 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-6P-201ENST00000606623 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.84□□□□□ -2.11
CKAP4Q07065 AC138627.2-201ENST00000624202 601 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
CKAP4Q07065 MIR3199-2-201ENST00000636243 86 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 U4.7-201ENST00000638126 106 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 AC092881.1-201ENST00000638218 2733 ntBASIC1.84□□□□□ -2.12
CKAP4Q07065 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CKAP4Q07065 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKAP4Q07065 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 RNU6-78P-201ENST00000362897 107 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 Y_RNA.142-201ENST00000363491 102 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 SNORA70.4-201ENST00000365509 134 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CKAP4Q07065 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKAP4Q07065 RNU6-214P-201ENST00000384130 107 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 SNORD73A-201ENST00000386062 65 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 FTH1P15-201ENST00000406984 280 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 MIR548K-201ENST00000408406 116 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 RPS20P15-201ENST00000412792 311 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 NCOR1P3-201ENST00000420479 303 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 TOMM20P4-201ENST00000427861 435 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 Z98742.2-201ENST00000431564 187 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 SNRPEP8-201ENST00000442866 260 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC096638.1-201ENST00000444678 216 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 MTND1P17-201ENST00000448961 204 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.83□□□□□ -2.12
CKAP4Q07065 AC092001.1-201ENST00000453012 261 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 MTND1P11-201ENST00000456661 876 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.83□□□□□ -2.12
CKAP4Q07065 AC103851.1-201ENST00000506833 274 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 RNU6-581P-201ENST00000516214 105 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 SNORA43.2-201ENST00000516652 128 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 RNU6-1332P-201ENST00000516666 104 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 SNORA31.23-201ENST00000517219 133 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 RNA5SP454-201ENST00000517231 127 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC109479.2-201ENST00000517842 174 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.83□□□□□ -2.12
CKAP4Q07065 AP005639.2-201ENST00000527592 928 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 CR383656.8-201ENST00000549046 145 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AL121821.2-201ENST00000556081 394 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC104581.2-201ENST00000572227 430 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 FGF7P1-201ENST00000582820 288 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AL117336.2-201ENST00000602435 335 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC091152.3-201ENST00000604227 325 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 ELOCP5-201ENST00000604924 333 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC064836.2-201ENST00000609491 462 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 TPTEP1-208ENST00000636884 213 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 ADAM3A-203ENST00000461344 2157 ntBASIC1.83□□□□□ -2.12
CKAP4Q07065 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.82□□□□□ -2.12
CKAP4Q07065 AC010889.1-201ENST00000566193 2666 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CKAP4Q07065 RNU6-562P-201ENST00000362731 107 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 RNU6-1280P-201ENST00000365211 107 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 RNU5E-7P-201ENST00000365290 117 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 Y_RNA.474-201ENST00000384341 102 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 RPS29P13-201ENST00000402041 169 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 SNAP23P1-201ENST00000433229 246 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CKAP4Q07065 AL161651.1-201ENST00000440882 223 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
CKAP4Q07065 AC006026.2-201ENST00000457376 180 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.82□□□□□ -2.12
CKAP4Q07065 MTND5P5-201ENST00000503764 376 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AC105029.1-201ENST00000520250 669 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.82□□□□□ -2.12
CKAP4Q07065 AC026371.1-201ENST00000551867 419 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.82□□□□□ -2.12
CKAP4Q07065 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.82□□□□□ -2.12
CKAP4Q07065 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.82□□□□□ -2.12
CKAP4Q07065 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 VN1R107P-201ENST00000601784 209 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AL391813.1-201ENST00000603098 260 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AC069294.1-201ENST00000608397 350 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
CKAP4Q07065 uc_338.15-201ENST00000615470 191 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms