Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGCS1Q01581 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGCS1Q01581 BNIP3P16-201ENST00000589779 534 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 SNRPGP17-201ENST00000603780 214 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AP001330.5-201ENST00000607176 411 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AC103591.3-201ENST00000608684 209 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCS1Q01581 OR5AK4P-201ENST00000635912 903 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HMGCS1Q01581 SNORD115-3-201ENST00000363100 82 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 RNU6-743P-201ENST00000364151 106 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 RNU6-1042P-201ENST00000384204 107 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 MIR29B2-201ENST00000385055 81 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 SNORD73A-201ENST00000386062 65 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 CALM2P3-201ENST00000400429 449 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 MIR1262-201ENST00000408276 93 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 VN1R108P-201ENST00000431580 830 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 MTATP6P26-201ENST00000445926 662 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 AC091874.1-201ENST00000511402 339 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 AC022616.8-201ENST00000533569 253 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGCS1Q01581 HSBP1P1-201ENST00000555205 166 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
HMGCS1Q01581 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGCS1Q01581 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGCS1Q01581 RNU4-15P-201ENST00000362613 141 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNU4-75P-201ENST00000364621 146 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 SNORD32A-201ENST00000364805 84 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNU4-20P-201ENST00000365601 151 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 SNORA69-201ENST00000383895 132 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNU6-38P-201ENST00000384085 107 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 SNORA12-201ENST00000391162 147 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 SNAP23P1-201ENST00000433229 246 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCS1Q01581 TPTE2P5-203ENST00000458118 728 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNU6-333P-201ENST00000459117 107 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNU6-261P-201ENST00000459506 102 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC083798.1-201ENST00000472671 131 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 RPL39P5-202ENST00000512505 151 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 MTND3P5-201ENST00000512798 333 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGCS1Q01581 RNA5SP401-201ENST00000515920 127 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 SNORA31.16-201ENST00000516773 139 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AP003034.1-201ENST00000534621 422 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCS1Q01581 VN1R80P-201ENST00000597126 338 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC048344.4-201ENST00000619744 527 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 AC124864.2-201ENST00000624736 186 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 MIR1248-201ENST00000629190 106 ntBASIC1.53□□□□□ -2.16
HMGCS1Q01581 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
HMGCS1Q01581 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 Y_RNA.378-201ENST00000365652 113 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 RNU6-611P-201ENST00000384276 104 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 SNORD37.1-201ENST00000390968 65 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 RNU6-780P-201ENST00000391030 104 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 MTCO3P40-201ENST00000392516 676 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 POLHP1-201ENST00000411806 470 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 DLGAP5P1-201ENST00000430307 464 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC244670.1-201ENST00000436879 112 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 PRELID3BP1-201ENST00000457142 540 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 SRRM1P2-201ENST00000464531 1192 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC108210.2-201ENST00000503681 201 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 MIR449C-201ENST00000516047 92 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 SNORA14.1-201ENST00000516113 141 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC069113.1-201ENST00000517763 267 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC115990.1-201ENST00000526957 301 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC018630.3-201ENST00000542637 96 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 HSPE1P4-201ENST00000550617 308 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 BNIP3P25-201ENST00000596023 559 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AL034555.1-201ENST00000604816 211 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 AC018889.1-201ENST00000605372 397 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGCS1Q01581 AL359314.1-201ENST00000616913 261 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 SNORD98-201ENST00000636377 67 ntBASIC1.52□□□□□ -2.17
HMGCS1Q01581 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HMGCS1Q01581 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms