Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.56□□□□□ -1.84
YBX1P67809 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.56□□□□□ -1.84
YBX1P67809 AL049830.2-201ENST00000480072 201 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RN7SKP209-201ENST00000516888 304 ntBASIC3.56□□□□□ -1.84
YBX1P67809 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.56□□□□□ -1.84
YBX1P67809 MIR5692C2-201ENST00000577959 77 ntBASIC3.56□□□□□ -1.84
YBX1P67809 MIR3145-201ENST00000580727 82 ntBASIC3.56□□□□□ -1.84
YBX1P67809 AL359198.2-201ENST00000611836 194 ntBASIC3.56□□□□□ -1.84
YBX1P67809 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
YBX1P67809 AF117829.1-206ENST00000621883 3802 ntBASIC3.56□□□□□ -1.84
YBX1P67809 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.56□□□□□ -1.84
YBX1P67809 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.56□□□□□ -1.84
YBX1P67809 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
YBX1P67809 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
YBX1P67809 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-884P-201ENST00000363889 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-1141P-201ENST00000364520 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-449P-201ENST00000383914 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-1027P-201ENST00000383998 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-217P-201ENST00000384164 104 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-959P-201ENST00000384671 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 Y_RNA.571-201ENST00000384753 98 ntBASIC3.55□□□□□ -1.84
YBX1P67809 PTMAP5-201ENST00000393073 333 ntBASIC3.55□□□□□ -1.84
YBX1P67809 AL035423.1-201ENST00000420331 213 ntBASIC3.55□□□□□ -1.84
YBX1P67809 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.55□□□□□ -1.84
YBX1P67809 IFNA11P-201ENST00000446352 526 ntBASIC3.55□□□□□ -1.84
YBX1P67809 HMGN2P7-201ENST00000456186 273 ntBASIC3.55□□□□□ -1.84
YBX1P67809 HMGN2P16-201ENST00000456802 261 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-625P-201ENST00000459412 107 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-191P-201ENST00000516295 94 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNA5SP164-201ENST00000516533 110 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNU6-1282P-201ENST00000516735 96 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RNA5SP54-201ENST00000516951 92 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RN7SKP289-201ENST00000517244 295 ntBASIC3.55□□□□□ -1.84
YBX1P67809 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.55□□□□□ -1.84
YBX1P67809 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.55□□□□□ -1.84
YBX1P67809 MIR6134-201ENST00000617606 109 ntBASIC3.55□□□□□ -1.84
YBX1P67809 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 AC092593.1-201ENST00000515413 1815 ntBASIC3.55□□□□□ -1.84
YBX1P67809 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
YBX1P67809 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
YBX1P67809 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
YBX1P67809 AC110491.1-201ENST00000562191 2010 ntBASIC3.54□□□□□ -1.84
YBX1P67809 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 FAM35BP-202ENST00000497389 3337 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.54□□□□□ -1.84
YBX1P67809 AL109809.4-201ENST00000603520 2185 ntBASIC3.54□□□□□ -1.84
YBX1P67809 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 MTND5P35-201ENST00000557537 1720 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNA5SP295-201ENST00000362655 121 ntBASIC3.54□□□□□ -1.84
YBX1P67809 Y_RNA.81-201ENST00000362997 102 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNU6-653P-201ENST00000363074 106 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNA5SP72-201ENST00000364442 117 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNU6-1280P-201ENST00000365211 107 ntBASIC3.54□□□□□ -1.84
YBX1P67809 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
YBX1P67809 Y_RNA.488-201ENST00000384403 102 ntBASIC3.54□□□□□ -1.84
YBX1P67809 Y_RNA.498-201ENST00000384460 102 ntBASIC3.54□□□□□ -1.84
YBX1P67809 SNORA40.19-201ENST00000390846 128 ntBASIC3.54□□□□□ -1.84
YBX1P67809 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC012308.1-201ENST00000451232 178 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RPL30P5-201ENST00000494923 336 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 RNU6-313P-201ENST00000516317 112 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNU1-95P-201ENST00000516357 160 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNU6-966P-201ENST00000516479 104 ntBASIC3.54□□□□□ -1.84
YBX1P67809 SNORA70.18-201ENST00000516696 98 ntBASIC3.54□□□□□ -1.84
YBX1P67809 RNU1-128P-201ENST00000516704 160 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC021231.3-201ENST00000558497 370 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC233702.2-202ENST00000562547 291 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC011471.1-201ENST00000585766 187 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.54□□□□□ -1.84
YBX1P67809 AC092628.2-201ENST00000622492 339 ntBASIC3.54□□□□□ -1.84
YBX1P67809 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.54□□□□□ -1.84
YBX1P67809 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.54□□□□□ -1.84
YBX1P67809 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
YBX1P67809 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
YBX1P67809 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
YBX1P67809 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.54□□□□□ -1.84
YBX1P67809 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
YBX1P67809 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.53□□□□□ -1.84
YBX1P67809 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
YBX1P67809 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
YBX1P67809 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.53□□□□□ -1.84
YBX1P67809 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.53□□□□□ -1.84
YBX1P67809 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.53□□□□□ -1.84
YBX1P67809 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
YBX1P67809 MIR186-201ENST00000384988 86 ntBASIC3.53□□□□□ -1.84
YBX1P67809 RNU6-131P-201ENST00000391144 107 ntBASIC3.53□□□□□ -1.84
YBX1P67809 RPL21P17-201ENST00000397467 475 ntBASIC3.53□□□□□ -1.84
YBX1P67809 AL138878.1-201ENST00000405131 347 ntBASIC3.53□□□□□ -1.84
YBX1P67809 RN7SKP61-201ENST00000410642 295 ntBASIC3.53□□□□□ -1.84
YBX1P67809 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms