Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL353778.1-201ENST00000603149 408 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC108747.1-201ENST00000609508 535 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC092574.1-201ENST00000609771 420 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC017083.3-201ENST00000609955 700 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC092106.3-201ENST00000611308 722 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC242852.1-201ENST00000612151 96 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.17□□□□□ -2.38
LSM3P62310 AC244015.1-201ENST00000622301 99 ntBASIC0.17□□□□□ -2.38
LSM3P62310 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
LSM3P62310 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
LSM3P62310 MTCYBP2-201ENST00000407745 171 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.16□□□□□ -2.38
LSM3P62310 TIMM9P3-201ENST00000428659 274 ntBASIC0.16□□□□□ -2.38
LSM3P62310 RSL24D1P8-201ENST00000434442 492 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AC007395.1-201ENST00000451333 677 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AL049829.1-201ENST00000465411 156 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AC104982.1-201ENST00000478775 574 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.16□□□□□ -2.38
LSM3P62310 AP001893.2-201ENST00000526949 202 ntBASIC0.16□□□□□ -2.38
LSM3P62310 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.16□□□□□ -2.38
LSM3P62310 AC087883.1-201ENST00000551882 391 ntBASIC0.16□□□□□ -2.38
LSM3P62310 MIR548AC-201ENST00000585049 88 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AL512605.2-201ENST00000592972 256 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AL353149.1-201ENST00000610667 244 ntBASIC0.16□□□□□ -2.38
LSM3P62310 GHRLOS.1-201ENST00000610995 70 ntBASIC0.16□□□□□ -2.38
LSM3P62310 U6.42-201ENST00000618440 107 ntBASIC0.16□□□□□ -2.38
LSM3P62310 AC100810.6-201ENST00000638068 285 ntBASIC0.16□□□□□ -2.38
LSM3P62310 RNU1-93P-201ENST00000364704 169 ntBASIC0.15□□□□□ -2.39
LSM3P62310 RNU6-142P-201ENST00000384019 107 ntBASIC0.15□□□□□ -2.39
LSM3P62310 RNU6-1031P-201ENST00000384773 107 ntBASIC0.15□□□□□ -2.39
LSM3P62310 SNORA12.1-201ENST00000390873 148 ntBASIC0.15□□□□□ -2.39
LSM3P62310 RN7SKP266-201ENST00000410232 287 ntBASIC0.15□□□□□ -2.39
LSM3P62310 RNA5SP201-201ENST00000410316 124 ntBASIC0.15□□□□□ -2.39
LSM3P62310 HIGD1AP15-201ENST00000416198 280 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AL590135.1-201ENST00000422215 156 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AC019205.3-201ENST00000424573 156 ntBASIC0.15□□□□□ -2.39
LSM3P62310 MTCYBP39-201ENST00000437562 491 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AC016700.2-201ENST00000446011 156 ntBASIC0.15□□□□□ -2.39
LSM3P62310 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.15□□□□□ -2.39
LSM3P62310 AL353718.1-201ENST00000451028 517 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.15□□□□□ -2.39
LSM3P62310 AC015911.1-201ENST00000495111 156 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AC010587.2-201ENST00000511727 448 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AC115990.1-201ENST00000526957 301 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AL513534.2-201ENST00000603836 250 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AL359821.1-201ENST00000605519 182 ntBASIC0.15□□□□□ -2.39
LSM3P62310 snoU13.31-201ENST00000607291 104 ntBASIC0.15□□□□□ -2.39
LSM3P62310 AC093875.1-201ENST00000623688 504 ntBASIC0.15□□□□□ -2.39
LSM3P62310 MTND5P16-201ENST00000460269 1703 ntBASIC0.15□□□□□ -2.39
LSM3P62310 MIRLET7D-201ENST00000362263 87 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RNU6-527P-201ENST00000363425 104 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
LSM3P62310 Y_RNA.578-201ENST00000390903 88 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM3P62310 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM3P62310 MTND5P2-201ENST00000442927 1142 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AL360271.2-201ENST00000447710 161 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.14□□□□□ -2.39
LSM3P62310 AL162395.1-201ENST00000457882 422 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AL049830.1-201ENST00000468034 425 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RN7SL429P-201ENST00000479090 223 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RN7SL489P-201ENST00000486185 223 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RN7SL327P-201ENST00000488659 223 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AC027338.1-201ENST00000514840 825 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RNA5SP102-201ENST00000516865 106 ntBASIC0.14□□□□□ -2.39
LSM3P62310 MTATP6P2-201ENST00000603319 678 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AL158032.1-201ENST00000605401 106 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AC012557.2-201ENST00000605919 418 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AC131235.4-201ENST00000609288 620 ntBASIC0.14□□□□□ -2.39
LSM3P62310 AL360219.1-201ENST00000610230 366 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RN7SL853P-201ENST00000617250 223 ntBASIC0.14□□□□□ -2.39
LSM3P62310 RNU6-545P-201ENST00000362681 104 ntBASIC0.13□□□□□ -2.39
LSM3P62310 SNORD116-13-201ENST00000384408 92 ntBASIC0.13□□□□□ -2.39
LSM3P62310 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.13□□□□□ -2.39
LSM3P62310 CALM2P2-201ENST00000428512 440 ntBASIC0.13□□□□□ -2.39
LSM3P62310 GAPDHP17-201ENST00000449858 1001 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AC022447.4-201ENST00000504053 364 ntBASIC0.13□□□□□ -2.39
LSM3P62310 HMGB1P29-201ENST00000505659 499 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AC113347.3-201ENST00000509113 148 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.13□□□□□ -2.39
LSM3P62310 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.13□□□□□ -2.39
LSM3P62310 AC005776.1-201ENST00000603164 290 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AL390123.1-201ENST00000603216 237 ntBASIC0.13□□□□□ -2.39
LSM3P62310 BCRP9-201ENST00000605312 388 ntBASIC0.13□□□□□ -2.39
LSM3P62310 AC006927.2-201ENST00000639256 389 ntBASIC0.13□□□□□ -2.39
LSM3P62310 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
LSM3P62310 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.13□□□□□ -2.39
LSM3P62310 Y_RNA.192-201ENST00000363977 102 ntBASIC0.12□□□□□ -2.39
LSM3P62310 RNU5E-7P-201ENST00000365290 117 ntBASIC0.12□□□□□ -2.39
LSM3P62310 SNORA36.2-201ENST00000384004 127 ntBASIC0.12□□□□□ -2.39
LSM3P62310 RNU6-1026P-201ENST00000384465 108 ntBASIC0.12□□□□□ -2.39
LSM3P62310 SNORD89-201ENST00000390981 114 ntBASIC0.12□□□□□ -2.39
LSM3P62310 RPS25P9-201ENST00000435591 252 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC243964.1-201ENST00000441814 261 ntBASIC0.12□□□□□ -2.39
LSM3P62310 RNU7-90P-201ENST00000459216 62 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC109445.1-201ENST00000512356 383 ntBASIC0.12□□□□□ -2.39
LSM3P62310 RN7SKP12-201ENST00000516275 143 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.12□□□□□ -2.39
LSM3P62310 AC022784.5-201ENST00000522241 437 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms