Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR521-1-201ENST00000384902 87 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 MIR29C-201ENST00000385231 88 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AC012306.1-201ENST00000423267 114 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.87□□□□□ -1.95
RHBDL3P58872 DAP3P1-201ENST00000441522 278 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 RPS29P27-201ENST00000463711 170 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 RPL39P5-202ENST00000512505 151 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AP000889.2-201ENST00000532684 490 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 MIR4529-201ENST00000578110 78 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AC023043.2-201ENST00000589678 1026 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AL133215.3-201ENST00000609801 448 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AC007014.2-201ENST00000615581 479 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AL132822.1-201ENST00000617063 513 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 AC006504.8-201ENST00000621046 635 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDL3P58872 RNU6-790P-201ENST00000384479 105 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AL357139.1-201ENST00000407792 426 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 SNORD23.1-201ENST00000408212 104 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 RN7SKP223-201ENST00000410582 62 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AL513185.2-201ENST00000425543 193 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDL3P58872 AC010095.1-201ENST00000443543 144 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDL3P58872 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.86□□□□□ -1.95
RHBDL3P58872 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.86□□□□□ -1.95
RHBDL3P58872 PCMTD1P1-201ENST00000455560 355 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.86□□□□□ -1.95
RHBDL3P58872 AC091874.1-201ENST00000511402 339 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 IGLV3-17-201ENST00000519099 244 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AC021269.2-201ENST00000532318 330 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDL3P58872 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDL3P58872 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDL3P58872 FGF7P1-201ENST00000582820 288 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AP000907.4-201ENST00000604143 237 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 AC005520.5-201ENST00000613926 164 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 SNORA43.4-201ENST00000629559 138 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDL3P58872 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDL3P58872 MTND5P6-201ENST00000422338 1798 ntBASIC2.86□□□□□ -1.95
RHBDL3P58872 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RHBDL3P58872 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RHBDL3P58872 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RHBDL3P58872 Y_RNA.135-201ENST00000363439 95 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RHBDL3P58872 RNU6-26P-201ENST00000383985 107 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RHBDL3P58872 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 Y_RNA.619-201ENST00000410951 90 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.85□□□□□ -1.95
RHBDL3P58872 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.85□□□□□ -1.95
RHBDL3P58872 USP9YP28-201ENST00000435142 589 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 AL353572.1-201ENST00000442490 417 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 FGF7P6-202ENST00000451282 293 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 RPS29P21-201ENST00000496272 170 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.85□□□□□ -1.95
RHBDL3P58872 RNA5SP281-201ENST00000516504 135 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 RNU6-965P-201ENST00000516721 96 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 HSPE1P18-201ENST00000517602 280 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.85□□□□□ -1.95
RHBDL3P58872 EIF4A1P12-201ENST00000551910 141 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.85□□□□□ -1.95
RHBDL3P58872 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.85□□□□□ -1.95
RHBDL3P58872 AC146944.4-201ENST00000602697 718 ntBASIC2.85□□□□□ -1.95
RHBDL3P58872 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RHBDL3P58872 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RHBDL3P58872 AC233981.2-201ENST00000611524 1614 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 U8.2-201ENST00000363156 134 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 RNU6-1286P-201ENST00000383871 107 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 MIR208B-201ENST00000401172 77 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 RN7SKP192-201ENST00000411291 327 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.84□□□□□ -1.95
RHBDL3P58872 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.84□□□□□ -1.95
RHBDL3P58872 AC005741.1-201ENST00000511094 432 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 RNU6-864P-201ENST00000516256 108 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 RNU7-193P-201ENST00000516723 65 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 AC107953.1-201ENST00000522216 297 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.84□□□□□ -1.95
RHBDL3P58872 AL078605.1-201ENST00000603529 500 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 PCGEM1.1-201ENST00000613431 131 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 AC137590.2-201ENST00000619709 240 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 AL450472.1-202ENST00000637286 180 ntBASIC2.84□□□□□ -1.95
RHBDL3P58872 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.84□□□□□ -1.95
RHBDL3P58872 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
RHBDL3P58872 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RHBDL3P58872 RNU6-1159P-201ENST00000362933 107 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 Y_RNA.123-201ENST00000363338 102 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 RNU6-968P-201ENST00000384076 107 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 RNU6-510P-201ENST00000391239 108 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 RNU2-48P-201ENST00000410694 191 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AL139415.2-201ENST00000431968 163 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.83□□□□□ -1.96
RHBDL3P58872 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.83□□□□□ -1.96
RHBDL3P58872 PRELID3BP1-201ENST00000457142 540 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC130509.1-201ENST00000464158 433 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC107032.1-201ENST00000485945 480 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC021146.2-201ENST00000504736 556 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms