Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 Y_RNA.367-201ENST00000365544 101 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 RNU6-321P-201ENST00000410912 106 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 RNU2-41P-201ENST00000410991 178 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AC078809.1-201ENST00000427601 140 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 ISCA1P6-201ENST00000427740 390 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 GPR143P-201ENST00000434155 205 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.21□□□□□ -2.22
CLDN18P56856 ATP5J2P3-201ENST00000451550 258 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AL162395.1-201ENST00000457882 422 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 snoU13.30-201ENST00000458951 104 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 TOMM22P6-201ENST00000465035 409 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 RAP1BP2-201ENST00000478270 544 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 MTCYBP18-201ENST00000501056 747 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AK3P2-201ENST00000507976 429 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 SNORD60.2-201ENST00000516883 86 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 RNA5SP503-201ENST00000517047 117 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AC090572.1-201ENST00000519251 160 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
CLDN18P56856 RRN3P3-201ENST00000549207 578 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.21□□□□□ -2.22
CLDN18P56856 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.21□□□□□ -2.22
CLDN18P56856 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.21□□□□□ -2.22
CLDN18P56856 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLDN18P56856 SEPT14P19-203ENST00000633205 211 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLDN18P56856 RNU4-28P-201ENST00000364739 141 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AC011233.1-201ENST00000422812 283 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AC092473.1-201ENST00000441098 221 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN18P56856 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN18P56856 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 RNU7-182P-201ENST00000459009 62 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AC016632.1-201ENST00000503994 196 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN18P56856 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.2□□□□□ -2.22
CLDN18P56856 AC079140.3-201ENST00000511111 550 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 FABP5P5-201ENST00000515537 406 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN18P56856 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN18P56856 MIR548AB-201ENST00000584917 84 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AC068787.1-201ENST00000623908 691 ntBASIC1.2□□□□□ -2.22
CLDN18P56856 AC092268.1-201ENST00000342691 405 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CLDN18P56856 RNU6-862P-201ENST00000362804 105 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 Y_RNA.132-201ENST00000363421 102 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 SNORD31B-201ENST00000364977 69 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 Y_RNA.504-201ENST00000384481 104 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 RNU6-195P-201ENST00000411352 109 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 SNRPFP4-201ENST00000456366 242 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AC005840.1-201ENST00000498412 377 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 RNU6-1098P-201ENST00000516772 96 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.19□□□□□ -2.22
CLDN18P56856 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.19□□□□□ -2.22
CLDN18P56856 AC021231.3-201ENST00000558497 370 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AL022161.1-201ENST00000604390 213 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 Z84480.1-201ENST00000605131 311 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AC008945.2-201ENST00000606056 604 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 PCGEM1.1-201ENST00000613431 131 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
CLDN18P56856 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CLDN18P56856 RNU6-552P-201ENST00000362869 119 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 Y_RNA.255-201ENST00000364581 97 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 SNORA12.2-201ENST00000391040 156 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 MRPL35P1-201ENST00000404272 572 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 RN7SKP61-201ENST00000410642 295 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 RPS3AP3-201ENST00000411933 242 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 HIGD1AP15-201ENST00000416198 280 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 ARL5AP1-201ENST00000418991 388 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.18□□□□□ -2.22
CLDN18P56856 MTND1P30-201ENST00000441241 901 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 PRPS1P1-201ENST00000445305 876 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.18□□□□□ -2.22
CLDN18P56856 AL163973.1-201ENST00000484753 577 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.18□□□□□ -2.22
CLDN18P56856 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.18□□□□□ -2.22
CLDN18P56856 RNU6-567P-201ENST00000516746 107 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 RNA5SP481-201ENST00000516814 122 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 EIF4A1P12-201ENST00000551910 141 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AC078795.3-201ENST00000602913 472 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AL356157.2-201ENST00000605122 111 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 MIR98-201ENST00000606724 119 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.18□□□□□ -2.22
CLDN18P56856 AC004223.4-201ENST00000612426 332 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.18□□□□□ -2.22
CLDN18P56856 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms