Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MYL12BP1-201ENST00000569826 507 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC4P56524 MIR4524B-201ENST00000581569 115 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC011494.1-201ENST00000596454 237 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AP000654.2-201ENST00000605633 586 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC124303.1-201ENST00000605703 360 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC069294.1-201ENST00000608397 350 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC019193.3-201ENST00000609144 554 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC4P56524 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC4P56524 SNORD114-19-201ENST00000363072 75 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 RNU6-593P-201ENST00000364716 112 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 SNORD32A-201ENST00000364805 84 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 RNU6-933P-201ENST00000384424 107 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 RNU6-220P-201ENST00000390919 107 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 Y_RNA.594-201ENST00000410373 140 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 ARL5AP4-201ENST00000430731 512 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 PCMTD1P1-201ENST00000455560 355 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC4P56524 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC4P56524 RNU7-26P-201ENST00000458980 63 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 SNORD19B-201ENST00000459623 84 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC4P56524 AC091874.1-201ENST00000511402 339 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 SMURF2P1-201ENST00000514992 481 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 Y_RNA.718-201ENST00000517110 102 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC4P56524 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
HDAC4P56524 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.68□□□□□ -1.98
HDAC4P56524 AC079598.5-201ENST00000547460 117 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 AC023824.2-201ENST00000566185 400 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 AC105137.2-201ENST00000569073 466 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.68□□□□□ -1.98
HDAC4P56524 AP001836.1-201ENST00000604675 523 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 AL050343.2-201ENST00000607338 280 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.68□□□□□ -1.98
HDAC4P56524 MIR203B-201ENST00000636080 86 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 KPNA2P1-201ENST00000458289 1591 ntBASIC2.68□□□□□ -1.98
HDAC4P56524 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC4P56524 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDAC4P56524 MTND4P29-201ENST00000503122 1372 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 RNU6-1010P-201ENST00000362757 107 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 Y_RNA.394-201ENST00000383942 103 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 RPL30P4-201ENST00000429309 333 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 MTND3P9-201ENST00000429526 346 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AL109933.2-201ENST00000452651 260 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AC112771.1-201ENST00000463581 102 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 RPL7P42-201ENST00000481005 679 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 RNU1-54P-201ENST00000517181 120 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 IGLV3-17-201ENST00000519099 244 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AP005902.1-201ENST00000521358 186 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AC121758.2-201ENST00000553271 193 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC4P56524 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 MIR4769-201ENST00000584126 77 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AC009229.3-201ENST00000608056 282 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 AC022140.2-201ENST00000623500 188 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC4P56524 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.67□□□□□ -1.98
HDAC4P56524 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.67□□□□□ -1.98
HDAC4P56524 AC002543.1-201ENST00000299783 1954 ntBASIC2.67□□□□□ -1.98
HDAC4P56524 Z75746.1-201ENST00000440243 2080 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 SNORA38-201ENST00000363946 132 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 Y_RNA.813-201ENST00000364639 102 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 Y_RNA.419-201ENST00000384041 102 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 RNU6-1297P-201ENST00000384415 104 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 RNU6-1050P-201ENST00000410388 107 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 RNU6-174P-201ENST00000410406 106 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 RNU2-23P-201ENST00000410545 195 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AP000275.1-201ENST00000411943 390 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 DAP3P1-201ENST00000441522 278 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC010095.1-201ENST00000443543 144 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 MTCO3P10-201ENST00000455912 772 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.66□□□□□ -1.98
HDAC4P56524 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC114801.2-201ENST00000503825 781 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC4P56524 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC4P56524 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC4P56524 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC4P56524 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC078795.3-201ENST00000602913 472 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC073410.2-201ENST00000603240 332 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 MIR8076-201ENST00000611401 83 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC084781.2-201ENST00000615568 161 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 AC007792.1-201ENST00000623023 402 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC4P56524 AL669831.3-213ENST00000636676 183 ntBASIC2.66□□□□□ -1.98
HDAC4P56524 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.65□□□□□ -1.98
HDAC4P56524 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC4P56524 Y_RNA.40-201ENST00000362645 93 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 SNORD50.1-201ENST00000362987 71 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 Y_RNA.259-201ENST00000364619 101 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms