Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL12P48061 AL360221.1-201ENST00000445989 335 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL12P48061 AL356010.1-201ENST00000456364 102 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 GMFBP1-201ENST00000467831 427 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC079382.1-201ENST00000493346 557 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.44□□□□□ -2.18
CXCL12P48061 AC105417.1-201ENST00000514691 285 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RNU6-377P-201ENST00000515965 102 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RNU6-965P-201ENST00000516721 96 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 SNORA25.17-201ENST00000517184 124 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AP000763.2-201ENST00000540641 163 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.44□□□□□ -2.18
CXCL12P48061 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.44□□□□□ -2.18
CXCL12P48061 HSBP1P1-201ENST00000555205 166 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC091135.1-201ENST00000585943 307 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC010620.1-201ENST00000601088 1102 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC073648.5-201ENST00000603502 305 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AL136363.2-201ENST00000604173 851 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC068944.2-201ENST00000610373 403 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL12P48061 AC090582.1-201ENST00000636321 199 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.44□□□□□ -2.18
CXCL12P48061 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL12P48061 OR4G1P-203ENST00000641984 1631 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL12P48061 RNY1-201ENST00000364228 113 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RNU6-336P-201ENST00000364891 107 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RNU6-692P-201ENST00000384496 107 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 MIR613-201ENST00000385248 95 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RNU6-293P-201ENST00000411259 106 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.43□□□□□ -2.18
CXCL12P48061 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL12P48061 MTCO2P19-201ENST00000427513 598 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 AC073464.1-201ENST00000429823 534 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL12P48061 AC243964.1-201ENST00000441814 261 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RPL23AP6-201ENST00000446637 472 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.43□□□□□ -2.18
CXCL12P48061 TPT1P7-201ENST00000458300 517 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.43□□□□□ -2.18
CXCL12P48061 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CXCL12P48061 AC079140.3-201ENST00000511111 550 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RN7SKP298-201ENST00000515950 94 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.43□□□□□ -2.18
CXCL12P48061 AP001893.2-201ENST00000526949 202 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 HIF1AP1-201ENST00000553642 175 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 MIR4299-201ENST00000577899 72 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 RN7SKP299-201ENST00000606679 301 ntBASIC1.43□□□□□ -2.18
CXCL12P48061 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CXCL12P48061 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CXCL12P48061 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CXCL12P48061 RNA5SP276-201ENST00000362580 94 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 Y_RNA.112-201ENST00000363250 102 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RNU6-266P-201ENST00000364225 107 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RNU6-546P-201ENST00000383991 107 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RNU6-1222P-201ENST00000384615 107 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 DEFB108C-201ENST00000400154 252 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 CDK8P2-201ENST00000415020 547 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AL353193.1-201ENST00000421444 268 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL12P48061 RPS15AP10-201ENST00000432472 382 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC002486.1-201ENST00000435098 391 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RNU7-63P-201ENST00000459054 62 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 SNRPGP7-201ENST00000469016 106 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RPS3AP17-201ENST00000472594 777 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL12P48061 HMGB1P35-201ENST00000503360 598 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 RNU5F-2P-201ENST00000516066 82 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AL137161.1-201ENST00000532231 390 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC022880.1-201ENST00000534017 973 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL12P48061 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.42□□□□□ -2.18
CXCL12P48061 MTCO3P23-201ENST00000561363 289 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC107304.1-201ENST00000604229 296 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AP001596.2-201ENST00000608410 312 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC007684.1-201ENST00000609671 477 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CXCL12P48061 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CXCL12P48061 AL132822.1-201ENST00000617063 513 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.42□□□□□ -2.18
CXCL12P48061 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.41□□□□□ -2.18
CXCL12P48061 SNORD115-3-201ENST00000363100 82 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-1285P-201ENST00000363480 105 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-743P-201ENST00000364151 106 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-996P-201ENST00000365438 107 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU5A-6P-201ENST00000384136 116 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-1103P-201ENST00000384150 107 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-517P-201ENST00000384362 110 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 Y_RNA.480-201ENST00000384364 102 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 MIR518A2-201ENST00000384966 87 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 RNU6-1158P-201ENST00000391167 107 ntBASIC1.41□□□□□ -2.18
CXCL12P48061 MIR1262-201ENST00000408276 93 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms