Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 SNORA9.3-201ENST00000516383 129 ntBASIC2.03□□□□□ -2.08
ATRXP46100 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.03□□□□□ -2.08
ATRXP46100 AL137100.2-201ENST00000555786 315 ntBASIC2.03□□□□□ -2.08
ATRXP46100 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.03□□□□□ -2.08
ATRXP46100 AC006504.6-201ENST00000590142 199 ntBASIC2.03□□□□□ -2.08
ATRXP46100 AC011890.2-201ENST00000613393 294 ntBASIC2.03□□□□□ -2.08
ATRXP46100 AC034102.8-201ENST00000615146 484 ntBASIC2.03□□□□□ -2.08
ATRXP46100 AL360181.4-201ENST00000621752 134 ntBASIC2.03□□□□□ -2.08
ATRXP46100 U4.7-201ENST00000638126 106 ntBASIC2.03□□□□□ -2.08
ATRXP46100 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.03□□□□□ -2.08
ATRXP46100 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.03□□□□□ -2.09
ATRXP46100 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.02□□□□□ -2.09
ATRXP46100 AC125238.1-201ENST00000448842 249 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RPL21P39-201ENST00000463605 483 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC087190.1-201ENST00000484462 480 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC093591.1-201ENST00000491435 481 ntBASIC2.02□□□□□ -2.09
ATRXP46100 HMGB1P30-201ENST00000492455 606 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC021146.2-201ENST00000504736 556 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 Y_RNA.691-201ENST00000516611 103 ntBASIC2.02□□□□□ -2.09
ATRXP46100 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.02□□□□□ -2.09
ATRXP46100 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.02□□□□□ -2.09
ATRXP46100 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.02□□□□□ -2.09
ATRXP46100 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATRXP46100 MAPK10-266ENST00000641066 6555 ntBASIC2.02□□□□□ -2.09
ATRXP46100 Y_RNA.212-201ENST00000364177 102 ntBASIC2.02□□□□□ -2.09
ATRXP46100 SNORA7.2-201ENST00000364446 145 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RNU6-827P-201ENST00000365553 106 ntBASIC2.02□□□□□ -2.09
ATRXP46100 Y_RNA.462-201ENST00000384268 102 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RPL27AP8-201ENST00000424277 446 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC007919.1-201ENST00000429380 217 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 RPS15AP28-201ENST00000435088 386 ntBASIC2.02□□□□□ -2.09
ATRXP46100 MIR2053-201ENST00000459295 91 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RPL30P14-201ENST00000482744 348 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC022447.4-201ENST00000504053 364 ntBASIC2.02□□□□□ -2.09
ATRXP46100 NDUFB4P9-201ENST00000511646 388 ntBASIC2.02□□□□□ -2.09
ATRXP46100 SNORA31.3-201ENST00000516029 96 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RNU6-567P-201ENST00000516746 107 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.02□□□□□ -2.09
ATRXP46100 AL121821.2-201ENST00000556081 394 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AL669831.4-202ENST00000590817 238 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AC092747.3-201ENST00000603769 301 ntBASIC2.02□□□□□ -2.09
ATRXP46100 AL121655.1-201ENST00000605811 308 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RMST_4.1-201ENST00000616886 107 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
ATRXP46100 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ATRXP46100 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATRXP46100 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ATRXP46100 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.01□□□□□ -2.09
ATRXP46100 RNU6-858P-201ENST00000362436 107 ntBASIC2.01□□□□□ -2.09
ATRXP46100 Y_RNA.145-201ENST00000363527 102 ntBASIC2.01□□□□□ -2.09
ATRXP46100 SNORA25.6-201ENST00000364121 118 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNU6-1027P-201ENST00000383998 107 ntBASIC2.01□□□□□ -2.09
ATRXP46100 MIR514A2-201ENST00000385131 88 ntBASIC2.01□□□□□ -2.09
ATRXP46100 MIR514A3-201ENST00000385132 88 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNU6-325P-201ENST00000411132 105 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNU6-293P-201ENST00000411259 106 ntBASIC2.01□□□□□ -2.09
ATRXP46100 SNORD56-201ENST00000413522 71 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
ATRXP46100 PMCHL1-202ENST00000423102 261 ntBASIC2.01□□□□□ -2.09
ATRXP46100 TMEM167AP1-201ENST00000423409 219 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AC096644.2-201ENST00000429278 159 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RPS15AP7-201ENST00000439294 405 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AL590664.1-201ENST00000448065 339 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.01□□□□□ -2.09
ATRXP46100 MRPL42P6-201ENST00000486397 371 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNU6-120P-201ENST00000516077 103 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNA5SP395-201ENST00000516567 118 ntBASIC2.01□□□□□ -2.09
ATRXP46100 RNA5SP380-201ENST00000517190 98 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AC087441.2-201ENST00000529141 262 ntBASIC2.01□□□□□ -2.09
ATRXP46100 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.01□□□□□ -2.09
ATRXP46100 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.01□□□□□ -2.09
ATRXP46100 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.01□□□□□ -2.09
ATRXP46100 HMGB1P24-202ENST00000615653 685 ntBASIC2.01□□□□□ -2.09
ATRXP46100 MIR6766-201ENST00000622641 72 ntBASIC2.01□□□□□ -2.09
ATRXP46100 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ATRXP46100 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.01□□□□□ -2.09
ATRXP46100 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATRXP46100 AC090740.1-201ENST00000623193 2262 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms