Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.404-201ENST00000383978 102 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 RNU6-310P-201ENST00000384655 107 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 RNU6-1140P-201ENST00000410517 106 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 EIF4EP4-201ENST00000424916 578 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 Z82205.1-201ENST00000428456 297 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC080013.2-201ENST00000460866 323 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 SCARNA3-201ENST00000517097 143 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 COX6CP5-201ENST00000527162 228 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 HSPE1P4-201ENST00000550617 308 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN9P43378 MIR4273-201ENST00000582824 84 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 CYP2C61P-201ENST00000604072 290 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 SNORA43.4-201ENST00000629559 138 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN9P43378 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
PTPN9P43378 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PTPN9P43378 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PTPN9P43378 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PTPN9P43378 ZNF299P-201ENST00000406845 1804 ntBASIC2.65□□□□□ -1.98
PTPN9P43378 Y_RNA.2-201ENST00000362330 96 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 Y_RNA.58-201ENST00000362807 102 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RNU6-655P-201ENST00000362858 107 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 Y_RNA.154-201ENST00000363624 102 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 Y_RNA.187-201ENST00000363918 113 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RNU4-76P-201ENST00000364509 141 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RNY3P1-201ENST00000365085 102 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RNY3-201ENST00000365484 102 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 SNORA75.6-201ENST00000391318 127 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 CBX3P9-201ENST00000402326 552 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RNU2-25P-201ENST00000411041 191 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AC243428.1-201ENST00000421099 264 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN9P43378 BX276092.3-201ENST00000424182 230 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN9P43378 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AL109933.2-201ENST00000452651 260 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AL121594.1-201ENST00000475906 575 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 RPL7P42-201ENST00000481005 679 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN9P43378 SRIP1-201ENST00000489235 288 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AC005741.1-201ENST00000511094 432 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.65□□□□□ -1.99
PTPN9P43378 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.65□□□□□ -1.99
PTPN9P43378 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.65□□□□□ -1.99
PTPN9P43378 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN9P43378 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN9P43378 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 AL050343.2-201ENST00000607338 280 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.65□□□□□ -1.99
PTPN9P43378 MTND4LP32-201ENST00000636111 270 ntBASIC2.65□□□□□ -1.99
PTPN9P43378 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTPN9P43378 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.65□□□□□ -1.99
PTPN9P43378 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTPN9P43378 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTPN9P43378 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTPN9P43378 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTPN9P43378 RNU6-212P-201ENST00000362642 104 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 Y_RNA.40-201ENST00000362645 93 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 Y_RNA.646-201ENST00000410980 101 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.64□□□□□ -1.99
PTPN9P43378 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.64□□□□□ -1.99
PTPN9P43378 HMGN1P13-201ENST00000505795 138 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 AC091874.1-201ENST00000511402 339 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 RNU6-567P-201ENST00000516746 107 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 AL160413.1-201ENST00000622780 310 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 AC090574.1-201ENST00000623186 233 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 AL450472.1-202ENST00000637286 180 ntBASIC2.64□□□□□ -1.99
PTPN9P43378 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.64□□□□□ -1.99
PTPN9P43378 MTND5P10-201ENST00000603719 1809 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PTPN9P43378 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTPN9P43378 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PTPN9P43378 RNU6-595P-201ENST00000363944 107 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 RNU6-968P-201ENST00000384076 107 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN9P43378 GPM6BP3-201ENST00000442797 145 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 RNU5F-2P-201ENST00000516066 82 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 RNU2-53P-201ENST00000516257 147 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 AP000889.1-201ENST00000530968 660 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 AC007375.1-201ENST00000554513 578 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 AC084781.2-201ENST00000615568 161 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 SCARNA4-201ENST00000629045 128 ntBASIC2.63□□□□□ -1.99
PTPN9P43378 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTPN9P43378 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
PTPN9P43378 AC080128.1-201ENST00000474389 1917 ntBASIC2.62□□□□□ -1.99
PTPN9P43378 AC233981.2-201ENST00000611524 1614 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms