Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC007215.1-201ENST00000464893 276 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC022868.1-201ENST00000517767 391 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC025588.3-201ENST00000604182 274 ntBASIC-0.34□□□□□ -2.46
HTTP42858 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.34□□□□□ -2.46
HTTP42858 RNU6-697P-201ENST00000363348 107 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC083799.1-201ENST00000366451 910 ntBASIC-0.34□□□□□ -2.46
HTTP42858 SNORA75.2-201ENST00000391138 150 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RNA5SP111-201ENST00000411386 101 ntBASIC-0.34□□□□□ -2.46
HTTP42858 ELOCP9-201ENST00000418624 239 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.34□□□□□ -2.46
HTTP42858 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.34□□□□□ -2.46
HTTP42858 AC002381.1-201ENST00000447049 280 ntBASIC-0.34□□□□□ -2.46
HTTP42858 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.34□□□□□ -2.46
HTTP42858 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AL356057.1-201ENST00000533798 831 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.34□□□□□ -2.46
HTTP42858 MIR3612-201ENST00000579753 87 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC091057.3-201ENST00000602684 733 ntBASIC-0.34□□□□□ -2.46
HTTP42858 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RNU6-152P-201ENST00000384037 107 ntBASIC-0.35□□□□□ -2.46
HTTP42858 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.35□□□□□ -2.46
HTTP42858 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.46
HTTP42858 MTATP6P31-201ENST00000406985 692 ntBASIC-0.35□□□□□ -2.46
HTTP42858 MIR548H2-201ENST00000408874 88 ntBASIC-0.35□□□□□ -2.46
HTTP42858 MTND1P9-201ENST00000453775 944 ntBASIC-0.35□□□□□ -2.46
HTTP42858 MTND5P13-201ENST00000513046 1079 ntBASIC-0.35□□□□□ -2.46
HTTP42858 AC092447.9-201ENST00000603395 144 ntBASIC-0.35□□□□□ -2.46
HTTP42858 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.35□□□□□ -2.46
HTTP42858 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.35□□□□□ -2.46
HTTP42858 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.47
HTTP42858 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.35□□□□□ -2.47
HTTP42858 RNU6-331P-201ENST00000384724 107 ntBASIC-0.35□□□□□ -2.47
HTTP42858 MIR593-201ENST00000384856 100 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AL603865.2-201ENST00000401679 213 ntBASIC-0.35□□□□□ -2.47
HTTP42858 RNU6-735P-201ENST00000410612 107 ntBASIC-0.35□□□□□ -2.47
HTTP42858 TAF13P2-201ENST00000416876 286 ntBASIC-0.35□□□□□ -2.47
HTTP42858 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 OR9P1P-201ENST00000496431 281 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AC008494.2-201ENST00000514544 370 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.35□□□□□ -2.47
HTTP42858 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.35□□□□□ -2.47
HTTP42858 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.35□□□□□ -2.47
HTTP42858 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 MTND2P5-201ENST00000432656 1006 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.35□□□□□ -2.47
HTTP42858 RNU6-947P-201ENST00000516264 106 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 AC109810.1-201ENST00000534066 224 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.35□□□□□ -2.47
HTTP42858 MIR5695-201ENST00000579717 85 ntBASIC-0.35□□□□□ -2.47
HTTP42858 MIR4436A-201ENST00000585278 85 ntBASIC-0.35□□□□□ -2.47
HTTP42858 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.35□□□□□ -2.47
HTTP42858 AC130324.3-201ENST00000614165 542 ntBASIC-0.35□□□□□ -2.47
HTTP42858 SNORD3E-202ENST00000627253 216 ntBASIC-0.35□□□□□ -2.47
HTTP42858 MTND5P16-201ENST00000460269 1703 ntBASIC-0.36□□□□□ -2.47
HTTP42858 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.36□□□□□ -2.47
HTTP42858 SNORD113.3-201ENST00000364630 78 ntBASIC-0.36□□□□□ -2.47
HTTP42858 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.36□□□□□ -2.47
HTTP42858 AC010376.1-201ENST00000522101 334 ntBASIC-0.36□□□□□ -2.47
HTTP42858 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.36□□□□□ -2.47
HTTP42858 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
HTTP42858 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.36□□□□□ -2.47
HTTP42858 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.36□□□□□ -2.47
HTTP42858 AC138749.5-201ENST00000611461 208 ntBASIC-0.36□□□□□ -2.47
HTTP42858 AC107075.1-201ENST00000613695 314 ntBASIC-0.36□□□□□ -2.47
HTTP42858 AC136475.10-201ENST00000620253 385 ntBASIC-0.36□□□□□ -2.47
HTTP42858 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.36□□□□□ -2.47
HTTP42858 SNORA80D-201ENST00000384488 135 ntBASIC-0.36□□□□□ -2.47
HTTP42858 MIR106A-201ENST00000384870 81 ntBASIC-0.36□□□□□ -2.47
HTTP42858 RNU6-994P-201ENST00000410507 111 ntBASIC-0.36□□□□□ -2.47
HTTP42858 NFU1P2-201ENST00000448700 469 ntBASIC-0.36□□□□□ -2.47
HTTP42858 AC114755.3-201ENST00000481111 251 ntBASIC-0.36□□□□□ -2.47
HTTP42858 AC091885.1-201ENST00000506658 268 ntBASIC-0.36□□□□□ -2.47
HTTP42858 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.36□□□□□ -2.47
HTTP42858 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.36□□□□□ -2.47
HTTP42858 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.36□□□□□ -2.47
HTTP42858 AC106038.2-201ENST00000520706 568 ntBASIC-0.36□□□□□ -2.47
HTTP42858 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
HTTP42858 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.36□□□□□ -2.47
HTTP42858 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
HTTP42858 RNY4P27-201ENST00000363341 96 ntBASIC-0.37□□□□□ -2.47
HTTP42858 RNU6-119P-201ENST00000364882 107 ntBASIC-0.37□□□□□ -2.47
HTTP42858 RNU6-296P-201ENST00000384608 107 ntBASIC-0.37□□□□□ -2.47
HTTP42858 MIR653-201ENST00000385279 96 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.37□□□□□ -2.47
HTTP42858 AL392003.1-201ENST00000434394 243 ntBASIC-0.37□□□□□ -2.47
HTTP42858 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.37□□□□□ -2.47
HTTP42858 AP002453.2-201ENST00000533503 320 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AC023050.3-201ENST00000541142 333 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.37□□□□□ -2.47
HTTP42858 MIR4441-201ENST00000582623 100 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.37□□□□□ -2.47
HTTP42858 RNU6-87P-201ENST00000607561 108 ntBASIC-0.37□□□□□ -2.47
HTTP42858 MIR643-201ENST00000385267 97 ntBASIC-0.37□□□□□ -2.47
HTTP42858 ARL5AP1-201ENST00000418991 388 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms