Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SOX3P41225 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.14□□□□□ -2.07
SOX3P41225 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SOX3P41225 RNU6-212P-201ENST00000362642 104 ntBASIC2.14□□□□□ -2.07
SOX3P41225 RNU6-655P-201ENST00000362858 107 ntBASIC2.14□□□□□ -2.07
SOX3P41225 RNU6-1210P-201ENST00000363775 107 ntBASIC2.14□□□□□ -2.07
SOX3P41225 Y_RNA.184-201ENST00000363884 108 ntBASIC2.14□□□□□ -2.07
SOX3P41225 RNU6-933P-201ENST00000384424 107 ntBASIC2.14□□□□□ -2.07
SOX3P41225 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
SOX3P41225 BTF3L4P2-201ENST00000392798 346 ntBASIC2.14□□□□□ -2.07
SOX3P41225 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
SOX3P41225 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
SOX3P41225 Y_RNA.604-201ENST00000410574 102 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC074085.1-201ENST00000413598 418 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
SOX3P41225 MTND3P9-201ENST00000429526 346 ntBASIC2.14□□□□□ -2.07
SOX3P41225 USP9YP8-201ENST00000441913 500 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC091951.2-201ENST00000500762 203 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC022447.4-201ENST00000504053 364 ntBASIC2.14□□□□□ -2.07
SOX3P41225 ANXA2P1-201ENST00000505539 926 ntBASIC2.14□□□□□ -2.07
SOX3P41225 RNU5F-2P-201ENST00000516066 82 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.14□□□□□ -2.07
SOX3P41225 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.14□□□□□ -2.07
SOX3P41225 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.14□□□□□ -2.07
SOX3P41225 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
SOX3P41225 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.14□□□□□ -2.07
SOX3P41225 RPL30P11-203ENST00000598995 310 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC078795.3-201ENST00000602913 472 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC018889.1-201ENST00000605372 397 ntBASIC2.14□□□□□ -2.07
SOX3P41225 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.14□□□□□ -2.07
SOX3P41225 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SOX3P41225 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SOX3P41225 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 MIR517A-201ENST00000385001 87 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AL356432.1-201ENST00000405809 419 ntBASIC2.13□□□□□ -2.07
SOX3P41225 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
SOX3P41225 NCOR1P3-201ENST00000420479 303 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
SOX3P41225 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AC244670.1-201ENST00000436879 112 ntBASIC2.13□□□□□ -2.07
SOX3P41225 DAP3P1-201ENST00000441522 278 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AC091874.1-201ENST00000511402 339 ntBASIC2.13□□□□□ -2.07
SOX3P41225 RNU6-875P-201ENST00000516488 106 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.13□□□□□ -2.07
SOX3P41225 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.13□□□□□ -2.07
SOX3P41225 HSPE1P4-201ENST00000550617 308 ntBASIC2.13□□□□□ -2.07
SOX3P41225 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.13□□□□□ -2.07
SOX3P41225 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.13□□□□□ -2.07
SOX3P41225 MIR5571-201ENST00000577998 113 ntBASIC2.13□□□□□ -2.07
SOX3P41225 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.13□□□□□ -2.07
SOX3P41225 MIR4298-201ENST00000584380 73 ntBASIC2.13□□□□□ -2.07
SOX3P41225 AC124303.1-201ENST00000605703 360 ntBASIC2.13□□□□□ -2.07
SOX3P41225 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 AC009994.1-201ENST00000606889 253 ntBASIC2.13□□□□□ -2.07
SOX3P41225 TPTEP1-208ENST00000636884 213 ntBASIC2.13□□□□□ -2.07
SOX3P41225 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SOX3P41225 AC009541.1-201ENST00000438279 2662 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
SOX3P41225 Y_RNA.142-201ENST00000363491 102 ntBASIC2.12□□□□□ -2.07
SOX3P41225 RNU1-91P-201ENST00000364746 163 ntBASIC2.12□□□□□ -2.07
SOX3P41225 U3.13-201ENST00000364804 214 ntBASIC2.12□□□□□ -2.07
SOX3P41225 RNU6-790P-201ENST00000384479 105 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIR521-1-201ENST00000384902 87 ntBASIC2.12□□□□□ -2.07
SOX3P41225 SNORA26.3-201ENST00000391119 136 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIR548F5-201ENST00000408421 86 ntBASIC2.12□□□□□ -2.07
SOX3P41225 RN7SKP158-201ENST00000410453 326 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AC007064.1-201ENST00000412238 351 ntBASIC2.12□□□□□ -2.07
SOX3P41225 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.12□□□□□ -2.07
SOX3P41225 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.12□□□□□ -2.07
SOX3P41225 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
SOX3P41225 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SOX3P41225 AC107399.1-201ENST00000451226 265 ntBASIC2.12□□□□□ -2.07
SOX3P41225 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.12□□□□□ -2.07
SOX3P41225 AC090515.1-201ENST00000465295 476 ntBASIC2.12□□□□□ -2.07
SOX3P41225 SNRPGP7-201ENST00000469016 106 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AC016632.1-201ENST00000503994 196 ntBASIC2.12□□□□□ -2.07
SOX3P41225 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
SOX3P41225 Y_RNA.702-201ENST00000516843 96 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AL713866.2-201ENST00000603579 219 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIR3976-201ENST00000606807 139 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.12□□□□□ -2.07
SOX3P41225 AC025253.1-201ENST00000613623 543 ntBASIC2.12□□□□□ -2.07
SOX3P41225 MIR6128-201ENST00000615528 109 ntBASIC2.12□□□□□ -2.07
SOX3P41225 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AC009233.1-201ENST00000616477 371 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AC104260.1-201ENST00000616660 539 ntBASIC2.12□□□□□ -2.07
SOX3P41225 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.12□□□□□ -2.07
SOX3P41225 SNORA43.4-201ENST00000629559 138 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AL450472.1-202ENST00000637286 180 ntBASIC2.12□□□□□ -2.07
SOX3P41225 AC135776.4-201ENST00000624300 1904 ntBASIC2.12□□□□□ -2.07
SOX3P41225 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
SOX3P41225 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SOX3P41225 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SOX3P41225 MTND4P12-201ENST00000498999 1377 ntBASIC2.11□□□□□ -2.07
SOX3P41225 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms