Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.41□□□□□ -2.02
HADHAP40939 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
HADHAP40939 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.41□□□□□ -2.02
HADHAP40939 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
HADHAP40939 AC023043.2-201ENST00000589678 1026 ntBASIC2.41□□□□□ -2.02
HADHAP40939 AC078795.3-201ENST00000602913 472 ntBASIC2.41□□□□□ -2.02
HADHAP40939 AC090617.10-201ENST00000624308 134 ntBASIC2.41□□□□□ -2.02
HADHAP40939 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
HADHAP40939 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HADHAP40939 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
HADHAP40939 MIR1294-201ENST00000408503 142 ntBASIC2.4□□□□□ -2.03
HADHAP40939 RNU6-325P-201ENST00000411132 105 ntBASIC2.4□□□□□ -2.03
HADHAP40939 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.4□□□□□ -2.03
HADHAP40939 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.4□□□□□ -2.03
HADHAP40939 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.4□□□□□ -2.03
HADHAP40939 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.4□□□□□ -2.03
HADHAP40939 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.4□□□□□ -2.03
HADHAP40939 AP000889.2-201ENST00000532684 490 ntBASIC2.4□□□□□ -2.03
HADHAP40939 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.4□□□□□ -2.03
HADHAP40939 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.4□□□□□ -2.03
HADHAP40939 RPL17P51-201ENST00000605218 238 ntBASIC2.4□□□□□ -2.03
HADHAP40939 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HADHAP40939 AC005520.5-201ENST00000613926 164 ntBASIC2.4□□□□□ -2.03
HADHAP40939 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.4□□□□□ -2.03
HADHAP40939 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HADHAP40939 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
HADHAP40939 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HADHAP40939 RNU6-562P-201ENST00000362731 107 ntBASIC2.39□□□□□ -2.03
HADHAP40939 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
HADHAP40939 SNORD32B-201ENST00000364460 84 ntBASIC2.39□□□□□ -2.03
HADHAP40939 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HADHAP40939 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HADHAP40939 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HADHAP40939 Y_RNA.599-201ENST00000410489 109 ntBASIC2.39□□□□□ -2.03
HADHAP40939 USP9YP28-201ENST00000435142 589 ntBASIC2.39□□□□□ -2.03
HADHAP40939 IFNA20P-201ENST00000436840 528 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.39□□□□□ -2.03
HADHAP40939 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.39□□□□□ -2.03
HADHAP40939 AC245102.2-201ENST00000448956 180 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AC145146.1-201ENST00000496370 254 ntBASIC2.39□□□□□ -2.03
HADHAP40939 SNORA31.16-201ENST00000516773 139 ntBASIC2.39□□□□□ -2.03
HADHAP40939 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AF235103.2-201ENST00000525753 346 ntBASIC2.39□□□□□ -2.03
HADHAP40939 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
HADHAP40939 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.39□□□□□ -2.03
HADHAP40939 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.39□□□□□ -2.03
HADHAP40939 AP000907.4-201ENST00000604143 237 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AC103810.6-201ENST00000606708 136 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AL133215.3-201ENST00000609801 448 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AC068944.2-201ENST00000610373 403 ntBASIC2.39□□□□□ -2.03
HADHAP40939 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AC093913.1-201ENST00000614178 329 ntBASIC2.39□□□□□ -2.03
HADHAP40939 AL132822.1-201ENST00000617063 513 ntBASIC2.39□□□□□ -2.03
HADHAP40939 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HADHAP40939 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HADHAP40939 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
HADHAP40939 RNA5SP201-201ENST00000410316 124 ntBASIC2.38□□□□□ -2.03
HADHAP40939 MTND4LP16-201ENST00000440828 295 ntBASIC2.38□□□□□ -2.03
HADHAP40939 DAP3P1-201ENST00000441522 278 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AC026436.1-201ENST00000510537 270 ntBASIC2.38□□□□□ -2.03
HADHAP40939 RNU6-864P-201ENST00000516256 108 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AC021269.2-201ENST00000532318 330 ntBASIC2.38□□□□□ -2.03
HADHAP40939 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.38□□□□□ -2.03
HADHAP40939 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.38□□□□□ -2.03
HADHAP40939 AC091544.4-201ENST00000555268 342 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.38□□□□□ -2.03
HADHAP40939 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.38□□□□□ -2.03
HADHAP40939 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.38□□□□□ -2.03
HADHAP40939 FGF7P1-201ENST00000582820 288 ntBASIC2.38□□□□□ -2.03
HADHAP40939 Z98751.3-201ENST00000604447 521 ntBASIC2.38□□□□□ -2.03
HADHAP40939 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HADHAP40939 SNORA43.4-201ENST00000629559 138 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AL450472.1-202ENST00000637286 180 ntBASIC2.38□□□□□ -2.03
HADHAP40939 AC100810.6-201ENST00000638068 285 ntBASIC2.38□□□□□ -2.03
HADHAP40939 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HADHAP40939 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.38□□□□□ -2.03
HADHAP40939 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HADHAP40939 U3.9-201ENST00000363823 204 ntBASIC2.37□□□□□ -2.03
HADHAP40939 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HADHAP40939 SNORA46.1-201ENST00000391069 153 ntBASIC2.37□□□□□ -2.03
HADHAP40939 RNU6-510P-201ENST00000391239 108 ntBASIC2.37□□□□□ -2.03
HADHAP40939 RNU2-48P-201ENST00000410694 191 ntBASIC2.37□□□□□ -2.03
HADHAP40939 SRIP3-201ENST00000413200 219 ntBASIC2.37□□□□□ -2.03
HADHAP40939 OOSP1P1-201ENST00000423265 274 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC012306.1-201ENST00000423267 114 ntBASIC2.37□□□□□ -2.03
HADHAP40939 MTND3P9-201ENST00000429526 346 ntBASIC2.37□□□□□ -2.03
HADHAP40939 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.37□□□□□ -2.03
HADHAP40939 MTATP6P13-201ENST00000438531 667 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.37□□□□□ -2.03
HADHAP40939 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC091874.1-201ENST00000511402 339 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.37□□□□□ -2.03
HADHAP40939 SNORA4.4-201ENST00000515921 135 ntBASIC2.37□□□□□ -2.03
HADHAP40939 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
HADHAP40939 MTND4LP26-201ENST00000518144 282 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.37□□□□□ -2.03
HADHAP40939 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HADHAP40939 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms