Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-1029P-201ENST00000384109 107 ntBASIC1.28□□□□□ -2.2
RFC3P40938 Y_RNA.480-201ENST00000384364 102 ntBASIC1.28□□□□□ -2.2
RFC3P40938 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.28□□□□□ -2.2
RFC3P40938 SNORA26.3-201ENST00000391119 136 ntBASIC1.28□□□□□ -2.2
RFC3P40938 RNA5SP201-201ENST00000410316 124 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AC013410.2-201ENST00000422627 201 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AL022238.1-201ENST00000442557 355 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.28□□□□□ -2.2
RFC3P40938 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RFC3P40938 AL033528.1-201ENST00000453780 140 ntBASIC1.28□□□□□ -2.2
RFC3P40938 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
RFC3P40938 MTCO2P6-201ENST00000463134 685 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
RFC3P40938 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.28□□□□□ -2.2
RFC3P40938 RNU6-232P-201ENST00000517144 64 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.28□□□□□ -2.2
RFC3P40938 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.28□□□□□ -2.2
RFC3P40938 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
RFC3P40938 MIR3923-201ENST00000579521 83 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AC012507.3-201ENST00000603556 477 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AP001506.1-201ENST00000615444 211 ntBASIC1.28□□□□□ -2.2
RFC3P40938 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
RFC3P40938 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
RFC3P40938 Y_RNA.67-201ENST00000362870 100 ntBASIC1.27□□□□□ -2.21
RFC3P40938 SNORA72.3-201ENST00000365074 132 ntBASIC1.27□□□□□ -2.21
RFC3P40938 RNU6-434P-201ENST00000384376 107 ntBASIC1.27□□□□□ -2.21
RFC3P40938 RNU6-393P-201ENST00000384475 107 ntBASIC1.27□□□□□ -2.21
RFC3P40938 RNU6-296P-201ENST00000384608 107 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AL117339.3-201ENST00000418733 162 ntBASIC1.27□□□□□ -2.21
RFC3P40938 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.27□□□□□ -2.21
RFC3P40938 RPL23AP95-201ENST00000426806 265 ntBASIC1.27□□□□□ -2.21
RFC3P40938 RPL31P35-201ENST00000431058 377 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AL133396.1-201ENST00000432048 687 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.27□□□□□ -2.21
RFC3P40938 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.27□□□□□ -2.21
RFC3P40938 PRPS1P1-201ENST00000445305 876 ntBASIC1.27□□□□□ -2.21
RFC3P40938 RNU7-125P-201ENST00000458760 62 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.27□□□□□ -2.21
RFC3P40938 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC079140.5-201ENST00000507882 310 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC097473.1-201ENST00000508142 408 ntBASIC1.27□□□□□ -2.21
RFC3P40938 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.27□□□□□ -2.21
RFC3P40938 ATP5EP1-201ENST00000510257 156 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.27□□□□□ -2.21
RFC3P40938 AP003034.1-201ENST00000534621 422 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC008015.1-201ENST00000555505 465 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.27□□□□□ -2.21
RFC3P40938 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC109446.1-201ENST00000566172 220 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.27□□□□□ -2.21
RFC3P40938 AC091805.2-201ENST00000603848 235 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC107304.1-201ENST00000604229 296 ntBASIC1.27□□□□□ -2.21
RFC3P40938 MIR98-201ENST00000606724 119 ntBASIC1.27□□□□□ -2.21
RFC3P40938 AC006566.1-201ENST00000608943 513 ntBASIC1.27□□□□□ -2.21
RFC3P40938 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
RFC3P40938 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RFC3P40938 RNU6-438P-201ENST00000365561 103 ntBASIC1.26□□□□□ -2.21
RFC3P40938 MIR1-2-201ENST00000384961 85 ntBASIC1.26□□□□□ -2.21
RFC3P40938 SNORA40.3-201ENST00000390964 122 ntBASIC1.26□□□□□ -2.21
RFC3P40938 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.26□□□□□ -2.21
RFC3P40938 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RFC3P40938 VN1R108P-201ENST00000431580 830 ntBASIC1.26□□□□□ -2.21
RFC3P40938 SNAP23P1-201ENST00000433229 246 ntBASIC1.26□□□□□ -2.21
RFC3P40938 UBE2V1P8-201ENST00000437166 265 ntBASIC1.26□□□□□ -2.21
RFC3P40938 SNRPEP8-201ENST00000442866 260 ntBASIC1.26□□□□□ -2.21
RFC3P40938 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.26□□□□□ -2.21
RFC3P40938 AC079382.1-201ENST00000493346 557 ntBASIC1.26□□□□□ -2.21
RFC3P40938 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.26□□□□□ -2.21
RFC3P40938 RNU2-69P-201ENST00000516061 100 ntBASIC1.26□□□□□ -2.21
RFC3P40938 HSPE1P4-201ENST00000550617 308 ntBASIC1.26□□□□□ -2.21
RFC3P40938 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
RFC3P40938 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RFC3P40938 AC122133.1-201ENST00000613964 233 ntBASIC1.26□□□□□ -2.21
RFC3P40938 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
RFC3P40938 RNU6-414P-201ENST00000363705 104 ntBASIC1.25□□□□□ -2.21
RFC3P40938 U3.9-201ENST00000363823 204 ntBASIC1.25□□□□□ -2.21
RFC3P40938 RNU4-48P-201ENST00000365559 182 ntBASIC1.25□□□□□ -2.21
RFC3P40938 SNORA32.2-201ENST00000384049 122 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.25□□□□□ -2.21
RFC3P40938 RPL21P111-201ENST00000418453 477 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
RFC3P40938 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
RFC3P40938 CYCSP46-201ENST00000423569 204 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC139712.2-201ENST00000424302 339 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.25□□□□□ -2.21
RFC3P40938 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
RFC3P40938 RPS27AP8-201ENST00000452665 445 ntBASIC1.25□□□□□ -2.21
RFC3P40938 RPS29P15-201ENST00000458329 171 ntBASIC1.25□□□□□ -2.21
RFC3P40938 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
RFC3P40938 GMFBP1-201ENST00000467831 427 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.25□□□□□ -2.21
RFC3P40938 HMGN1P13-201ENST00000505795 138 ntBASIC1.25□□□□□ -2.21
RFC3P40938 SNORA25.17-201ENST00000517184 124 ntBASIC1.25□□□□□ -2.21
RFC3P40938 SUMO2P18-201ENST00000518873 252 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AP005597.4-201ENST00000526762 229 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RFC3P40938 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.25□□□□□ -2.21
RFC3P40938 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.25□□□□□ -2.21
RFC3P40938 MTCO3P23-201ENST00000561363 289 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC109446.2-201ENST00000567872 497 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms