Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.32□□□□□ -2.2
BRCA1P38398 AC245884.10-201ENST00000597355 337 ntBASIC1.32□□□□□ -2.2
BRCA1P38398 Z69720.2-201ENST00000624755 279 ntBASIC1.32□□□□□ -2.2
BRCA1P38398 RNU6-434P-201ENST00000384376 107 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
BRCA1P38398 AC092809.3-201ENST00000415453 231 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AL031779.1-201ENST00000415663 330 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AL121601.2-201ENST00000438019 707 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
BRCA1P38398 RNA5SP269-201ENST00000459032 137 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 RPS23P5-201ENST00000495419 428 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AC034114.1-201ENST00000520293 285 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.31□□□□□ -2.2
BRCA1P38398 MIR3941-201ENST00000582572 103 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
BRCA1P38398 AC092140.2-201ENST00000618027 521 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 SEPT14P19-203ENST00000633205 211 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
BRCA1P38398 Y_RNA.99-201ENST00000363138 105 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 RNU6-39P-201ENST00000384344 107 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 MIR578-201ENST00000384828 96 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 EIF4EP2-201ENST00000422816 654 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.31□□□□□ -2.2
BRCA1P38398 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.31□□□□□ -2.2
BRCA1P38398 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.31□□□□□ -2.2
BRCA1P38398 LRRC34P2-201ENST00000514850 553 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.31□□□□□ -2.2
BRCA1P38398 AL360085.1-201ENST00000604713 532 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 AC079248.2-201ENST00000623779 326 ntBASIC1.31□□□□□ -2.2
BRCA1P38398 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 RNU6-179P-201ENST00000363350 107 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 RNU4-42P-201ENST00000364738 142 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 MIR532-201ENST00000385025 91 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
BRCA1P38398 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.3□□□□□ -2.2
BRCA1P38398 AC005534.2-201ENST00000431047 433 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AC244670.1-201ENST00000436879 112 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 RNU7-182P-201ENST00000459009 62 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 RNA5SP57-201ENST00000459463 123 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AC011005.2-201ENST00000487324 359 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AC022447.4-201ENST00000504053 364 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AP003392.2-201ENST00000527269 208 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 AC021231.3-201ENST00000558497 370 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 MIR3923-201ENST00000579521 83 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 BNIP3P39-201ENST00000601077 554 ntBASIC1.3□□□□□ -2.2
BRCA1P38398 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.3□□□□□ -2.2
BRCA1P38398 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
BRCA1P38398 MTND5P9-201ENST00000503854 1755 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RNU6-78P-201ENST00000362897 107 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRCA1P38398 RPS3AP3-201ENST00000411933 242 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 OR6C66P-201ENST00000414917 930 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 HIGD1AP15-201ENST00000416198 280 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.29□□□□□ -2.2
BRCA1P38398 AL357134.1-201ENST00000445848 426 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AL360271.2-201ENST00000447710 161 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC116562.3-201ENST00000506136 177 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RBBP4P6-201ENST00000508098 202 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 MTCO3P28-201ENST00000513351 515 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 COPS8P3-201ENST00000526024 482 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC068587.5-201ENST00000528506 175 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC023050.3-201ENST00000541142 333 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC234772.3-201ENST00000602277 528 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.29□□□□□ -2.2
BRCA1P38398 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRCA1P38398 SNORA62.1-201ENST00000364287 154 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RNU6-533P-201ENST00000384144 107 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RNU6-1105P-201ENST00000384774 107 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.29□□□□□ -2.2
BRCA1P38398 FTH1P12-201ENST00000432137 551 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC009961.2-201ENST00000435771 251 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC073614.1-201ENST00000438690 650 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RPL39P29-201ENST00000447779 157 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.29□□□□□ -2.2
BRCA1P38398 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.29□□□□□ -2.2
BRCA1P38398 AC005741.1-201ENST00000511094 432 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRCA1P38398 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRCA1P38398 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.29□□□□□ -2.2
BRCA1P38398 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 RSL24D1P11-201ENST00000591045 491 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AL157786.1-207ENST00000627771 695 ntBASIC1.29□□□□□ -2.2
BRCA1P38398 AL390237.1-201ENST00000404226 1415 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 RNU6-212P-201ENST00000362642 104 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.28□□□□□ -2.2
BRCA1P38398 AL596276.1-201ENST00000434465 418 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 MTATP6P16-201ENST00000434543 526 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AL122001.1-201ENST00000457027 370 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 RNU6-123P-201ENST00000516163 102 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 SNORA31.17-201ENST00000516953 127 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AC022880.1-201ENST00000534017 973 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 BNIP3P16-201ENST00000589779 534 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AC245014.2-201ENST00000603689 287 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms