Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC000111.3-201ENST00000433478 193 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 RPL23AP50-201ENST00000434149 455 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 MTCO3P43-201ENST00000440974 771 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 MTND2P6-201ENST00000455337 1030 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.27□□□□□ -2.45
SNCAP37840 MTND2P33-201ENST00000506452 1031 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.27□□□□□ -2.45
SNCAP37840 AC091135.1-201ENST00000585943 307 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 BNIP3P9-201ENST00000603714 553 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AC090517.2-201ENST00000614966 680 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AC008147.4-201ENST00000617570 1204 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 AL079343.1-201ENST00000572358 1771 ntBASIC-0.27□□□□□ -2.45
SNCAP37840 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.28□□□□□ -2.45
SNCAP37840 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
SNCAP37840 SNORA72.2-201ENST00000365028 127 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 SNORA32.2-201ENST00000384049 122 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 RNU6-793P-201ENST00000384233 104 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
SNCAP37840 RNA5SP504-201ENST00000410676 117 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.28□□□□□ -2.45
SNCAP37840 AC021146.8-201ENST00000507455 733 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.28□□□□□ -2.45
SNCAP37840 AC016256.1-201ENST00000547971 354 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.28□□□□□ -2.45
SNCAP37840 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 AC092325.1-201ENST00000566449 554 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 SNORA59B-202ENST00000578183 701 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 AL136363.2-201ENST00000604173 851 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 AC018889.1-201ENST00000605372 397 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 AC097065.2-201ENST00000608159 533 ntBASIC-0.28□□□□□ -2.45
SNCAP37840 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 MIR301A-201ENST00000385261 86 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 RNU6-700P-201ENST00000391043 107 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 RNU6-932P-201ENST00000391108 106 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 RNU6-952P-201ENST00000391164 108 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 FCF1P10-201ENST00000407590 479 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC060773.1-201ENST00000421698 310 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.29□□□□□ -2.46
SNCAP37840 HMGN2P34-201ENST00000437647 269 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.29□□□□□ -2.46
SNCAP37840 snoU13.25-201ENST00000458945 104 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 HMGB1P29-201ENST00000505659 499 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC121161.1-201ENST00000510606 652 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 MTND4LP26-201ENST00000518144 282 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.29□□□□□ -2.46
SNCAP37840 AC022523.2-201ENST00000561045 150 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 MIR1273G-201ENST00000577677 100 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 MIR3678-201ENST00000578455 94 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC136475.10-201ENST00000620253 385 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AL157786.1-207ENST00000627771 695 ntBASIC-0.29□□□□□ -2.46
SNCAP37840 AC073544.1-201ENST00000600110 1595 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 RNA5SP496-201ENST00000391240 109 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 AL358176.2-201ENST00000425769 204 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 DPRXP1-201ENST00000426312 460 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
SNCAP37840 AP000797.1-201ENST00000478870 387 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.3□□□□□ -2.46
SNCAP37840 AC012414.2-201ENST00000559474 187 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 AC011712.1-201ENST00000588959 234 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 AC104408.1-201ENST00000605241 170 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 AC243773.3-201ENST00000613270 256 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 AL390237.1-201ENST00000404226 1415 ntBASIC-0.3□□□□□ -2.46
SNCAP37840 SNORD114-5-201ENST00000362928 70 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 RNU6-353P-201ENST00000364266 108 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 RNU6-438P-201ENST00000365561 103 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 RNU6-817P-201ENST00000391083 104 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.31□□□□□ -2.46
SNCAP37840 MTCYBP10-201ENST00000424905 650 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC073261.1-201ENST00000429409 121 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AL591704.1-201ENST00000432574 275 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
SNCAP37840 AC245047.8-201ENST00000456455 284 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC016925.1-201ENST00000458303 298 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.31□□□□□ -2.46
SNCAP37840 RNU6-947P-201ENST00000516264 106 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC027419.1-201ENST00000522976 328 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.31□□□□□ -2.46
SNCAP37840 AL133153.1-201ENST00000557756 303 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC138915.2-201ENST00000569776 97 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.31□□□□□ -2.46
SNCAP37840 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.31□□□□□ -2.46
SNCAP37840 AC010620.1-201ENST00000601088 1102 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AL929325.1-201ENST00000603096 117 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 MIR8087-201ENST00000612745 78 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 MIR1264-201ENST00000616374 69 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AC010975.3-201ENST00000618727 978 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 AL031667.3-201ENST00000620124 655 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.31□□□□□ -2.46
SNCAP37840 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6-72P-201ENST00000384285 79 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6-549P-201ENST00000384433 107 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms