Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-864P-201ENST00000516256 108 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCLP35914 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGCLP35914 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCLP35914 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 MIR3672-201ENST00000584290 82 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 AC018638.8-201ENST00000588755 281 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 AC023043.2-201ENST00000589678 1026 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 AC069294.1-201ENST00000608397 350 ntBASIC1.98□□□□□ -2.09
HMGCLP35914 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCLP35914 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCLP35914 AP000560.1-201ENST00000624150 1937 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGCLP35914 SNORD73A-201ENST00000386062 65 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 CBX3P9-201ENST00000402326 552 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCLP35914 RN7SKP61-201ENST00000410642 295 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AP000275.1-201ENST00000411943 390 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 MTCO3P46-201ENST00000425787 232 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AL591043.1-201ENST00000432461 424 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCLP35914 AC112771.1-201ENST00000463581 102 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCLP35914 AL121594.1-201ENST00000475906 575 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 MTCO2P30-201ENST00000503662 364 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCLP35914 MIR3199-1-201ENST00000582434 88 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC091135.1-201ENST00000585943 307 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 ELOCP5-201ENST00000604924 333 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HMGCLP35914 uc_338.15-201ENST00000615470 191 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
HMGCLP35914 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMGCLP35914 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCLP35914 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCLP35914 RNU6-1141P-201ENST00000364520 107 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RNU6-692P-201ENST00000384496 107 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RNU6-831P-201ENST00000384548 107 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMGCLP35914 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCLP35914 MIR450B-201ENST00000401182 78 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL030996.1-201ENST00000411430 235 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 VN1R36P-201ENST00000414936 291 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCLP35914 AL133396.1-201ENST00000432048 687 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 USP9YP28-201ENST00000435142 589 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AC124916.1-201ENST00000444020 547 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 NFU1P2-201ENST00000448700 469 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RNU6-1037P-201ENST00000459571 107 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RN7SL429P-201ENST00000479090 223 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RN7SL489P-201ENST00000486185 223 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RN7SL327P-201ENST00000488659 223 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RPL30P1-201ENST00000488676 339 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 RNU6-323P-201ENST00000521915 107 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 TRAV32-201ENST00000553993 340 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AC103996.1-201ENST00000555468 102 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCLP35914 AP001836.1-201ENST00000604675 523 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL357078.3-201ENST00000607528 618 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCLP35914 RN7SL853P-201ENST00000617250 223 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL136221.1-201ENST00000621449 509 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AL450472.1-202ENST00000637286 180 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 AC241585.2-209ENST00000638217 143 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMGCLP35914 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HMGCLP35914 MTND4P23-201ENST00000447723 1363 ntBASIC1.96□□□□□ -2.1
HMGCLP35914 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCLP35914 RNU6-1210P-201ENST00000363775 107 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 Y_RNA.279-201ENST00000364763 95 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 Y_RNA.301-201ENST00000364990 103 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 RNU6-293P-201ENST00000411259 106 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCLP35914 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCLP35914 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCLP35914 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCLP35914 SMURF2P1-201ENST00000514992 481 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 RNU6-256P-201ENST00000516747 97 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCLP35914 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCLP35914 AC073410.2-201ENST00000603240 332 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCLP35914 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCLP35914 AC007792.1-201ENST00000623023 402 ntBASIC1.95□□□□□ -2.1
HMGCLP35914 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCLP35914 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCLP35914 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 Y_RNA.72-201ENST00000362894 103 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 RNU6-527P-201ENST00000363425 104 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 Y_RNA.373-201ENST00000365600 103 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 RNU6-43P-201ENST00000384302 107 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 AC078809.1-201ENST00000427601 140 ntBASIC1.94□□□□□ -2.1
HMGCLP35914 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGCLP35914 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms