Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 FABP5P4-201ENST00000437203 171 ntBASIC0.22□□□□□ -2.37
SDC4P31431 MTND2P30-201ENST00000456663 382 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AL162395.1-201ENST00000457882 422 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AC093899.1-201ENST00000457984 376 ntBASIC0.22□□□□□ -2.37
SDC4P31431 RNU7-34P-201ENST00000459394 64 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AC010531.2-201ENST00000465012 153 ntBASIC0.22□□□□□ -2.37
SDC4P31431 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.22□□□□□ -2.37
SDC4P31431 AC022447.4-201ENST00000504053 364 ntBASIC0.22□□□□□ -2.37
SDC4P31431 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.22□□□□□ -2.37
SDC4P31431 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
SDC4P31431 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.22□□□□□ -2.37
SDC4P31431 AL512347.1-201ENST00000566420 503 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AC009509.4-201ENST00000619202 509 ntBASIC0.22□□□□□ -2.37
SDC4P31431 AC131159.1-201ENST00000621854 213 ntBASIC0.22□□□□□ -2.37
SDC4P31431 Z69720.2-201ENST00000624755 279 ntBASIC0.22□□□□□ -2.37
SDC4P31431 Y_RNA.796-201ENST00000364268 102 ntBASIC0.21□□□□□ -2.38
SDC4P31431 Y_RNA.799-201ENST00000364992 102 ntBASIC0.21□□□□□ -2.38
SDC4P31431 SNORA72.2-201ENST00000365028 127 ntBASIC0.21□□□□□ -2.38
SDC4P31431 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
SDC4P31431 AL603865.2-201ENST00000401679 213 ntBASIC0.21□□□□□ -2.38
SDC4P31431 RNA5SP511-201ENST00000410487 115 ntBASIC0.21□□□□□ -2.38
SDC4P31431 MTCO1P17-201ENST00000411522 491 ntBASIC0.21□□□□□ -2.38
SDC4P31431 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
SDC4P31431 AL031313.1-201ENST00000448435 256 ntBASIC0.21□□□□□ -2.38
SDC4P31431 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.21□□□□□ -2.38
SDC4P31431 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.21□□□□□ -2.38
SDC4P31431 AC112206.3-201ENST00000514578 389 ntBASIC0.21□□□□□ -2.38
SDC4P31431 RNU6-922P-201ENST00000516753 99 ntBASIC0.21□□□□□ -2.38
SDC4P31431 AC011979.2-201ENST00000527568 352 ntBASIC0.21□□□□□ -2.38
SDC4P31431 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.21□□□□□ -2.38
SDC4P31431 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.21□□□□□ -2.38
SDC4P31431 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.21□□□□□ -2.38
SDC4P31431 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.21□□□□□ -2.38
SDC4P31431 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.21□□□□□ -2.38
SDC4P31431 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SDC4P31431 VN1R87P-201ENST00000596706 487 ntBASIC0.21□□□□□ -2.38
SDC4P31431 CTHRC1P1-201ENST00000605383 469 ntBASIC0.21□□□□□ -2.38
SDC4P31431 AC012557.2-201ENST00000605919 418 ntBASIC0.21□□□□□ -2.38
SDC4P31431 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.21□□□□□ -2.38
SDC4P31431 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
SDC4P31431 RNY1-201ENST00000364228 113 ntBASIC0.2□□□□□ -2.38
SDC4P31431 RNU6-384P-201ENST00000364900 104 ntBASIC0.2□□□□□ -2.38
SDC4P31431 Y_RNA.508-201ENST00000384502 114 ntBASIC0.2□□□□□ -2.38
SDC4P31431 RNU6-1237P-201ENST00000384777 107 ntBASIC0.2□□□□□ -2.38
SDC4P31431 RPS3AP36-201ENST00000398190 775 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AC007969.2-201ENST00000441891 191 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.2□□□□□ -2.38
SDC4P31431 AC007395.1-201ENST00000451333 677 ntBASIC0.2□□□□□ -2.38
SDC4P31431 MTCO3P9-201ENST00000506989 781 ntBASIC0.2□□□□□ -2.38
SDC4P31431 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.2□□□□□ -2.38
SDC4P31431 AL132657.2-201ENST00000564417 358 ntBASIC0.2□□□□□ -2.38
SDC4P31431 MIR3146-201ENST00000580367 79 ntBASIC0.2□□□□□ -2.38
SDC4P31431 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.2□□□□□ -2.38
SDC4P31431 AC110760.3-201ENST00000598794 467 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AC080078.2-201ENST00000603766 501 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AL031281.1-201ENST00000604049 488 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AL034555.1-201ENST00000604816 211 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AC008147.4-201ENST00000617570 1204 ntBASIC0.2□□□□□ -2.38
SDC4P31431 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AC024940.5-201ENST00000622889 474 ntBASIC0.2□□□□□ -2.38
SDC4P31431 AC093875.1-201ENST00000623688 504 ntBASIC0.2□□□□□ -2.38
SDC4P31431 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SDC4P31431 SNORD31B-201ENST00000364977 69 ntBASIC0.19□□□□□ -2.38
SDC4P31431 RNU6-468P-201ENST00000384003 109 ntBASIC0.19□□□□□ -2.38
SDC4P31431 RNU6-950P-201ENST00000384651 107 ntBASIC0.19□□□□□ -2.38
SDC4P31431 RNU6-1105P-201ENST00000384774 107 ntBASIC0.19□□□□□ -2.38
SDC4P31431 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
SDC4P31431 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.19□□□□□ -2.38
SDC4P31431 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
SDC4P31431 AL606662.1-201ENST00000445763 553 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AC016925.1-201ENST00000458303 298 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AC010587.2-201ENST00000511727 448 ntBASIC0.19□□□□□ -2.38
SDC4P31431 SNORA68.3-201ENST00000515906 83 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.19□□□□□ -2.38
SDC4P31431 HMGN1P30-201ENST00000589286 268 ntBASIC0.19□□□□□ -2.38
SDC4P31431 GHRLOS.1-201ENST00000610995 70 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AC097372.5-201ENST00000623665 376 ntBASIC0.19□□□□□ -2.38
SDC4P31431 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
SDC4P31431 MIR544A-201ENST00000384855 91 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC060773.1-201ENST00000421698 310 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.18□□□□□ -2.38
SDC4P31431 MTCYBP39-201ENST00000437562 491 ntBASIC0.18□□□□□ -2.38
SDC4P31431 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.18□□□□□ -2.38
SDC4P31431 MTCO1P27-201ENST00000448269 226 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC233266.1-201ENST00000454518 96 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC104982.1-201ENST00000478775 574 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC007834.2-201ENST00000536310 343 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC090888.2-201ENST00000559765 1144 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC109446.1-201ENST00000566172 220 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.18□□□□□ -2.38
SDC4P31431 AL929325.1-201ENST00000603096 117 ntBASIC0.18□□□□□ -2.38
SDC4P31431 MIR98-201ENST00000606724 119 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC242852.1-201ENST00000612151 96 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC136475.10-201ENST00000620253 385 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC244015.1-201ENST00000622301 99 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC106754.2-201ENST00000623006 233 ntBASIC0.18□□□□□ -2.38
SDC4P31431 AC004808.1-201ENST00000627671 721 ntBASIC0.18□□□□□ -2.38
SDC4P31431 snoZ40.1-201ENST00000364540 72 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms